Gene Information

Name : GQS_05825 (GQS_05825)
Accession : YP_004762742.1
Strain : Thermococcus sp. 4557
Genome accession: NC_015865
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1084731 - 1085738 bp
Length : 1008 bp
Strand : -
Note : COG0214 Pyridoxine biosynthesis enzyme

DNA sequence :
ATGGGAAAGCTCCACGTTATAGAGGCCAAGGGCACGGACAGGCTGAAGCGCGGTTTTGCCAAGATGGTTAAGGGCGGAGT
GATAATGGACGTCACGAACGCGGAGCAGGCCAGAATAGCGGAGGAAGCCGGTGCGGTTTCGGTCATGGCCCTCCACAGGG
TTCCGGCGGACATCAGGAAGGCCGGCGGCGTGGCGAGGATGGCCCCGATAGAGAAGATTCAGGAGATAATGGACGCGGTG
ACCATTCCGGTTATGGCGAAGGTCAGGATCGGCCACGTCGCCGAGGCGAAAATACTCGAAGCTCTGGGCGTTGACATGAT
TGACGAGAGCGAGGTTCTCACGCCTTCTGACCCCTACTTCCACATAGACAAGCGCGAGTTCAACGTCCCCTTCGTCTGCG
GCAACAGGAACCTCGGTGAGGCCGTCAGGAGGATATGGGAAGGCGCGGCAATGATGAGGACGAAGGGCGAGGCTGGGACT
GGAAACATCATCGAGGCGGTAAGGCACGTCCGCCTTCTCAGGGACAACATAGCACTCCTCCAGCGCATGACGGATGAGCA
GGTCTACGGAGTGGCTGAAAAGTTCGCGGAGCCTTATTTCAGGCTGGCCTTCGAGGTCAGGGAAATCAGCGGTCTGCCAA
GGCACGTTCTCGAGAACGAGCCAATCTATGGTTCCTACACCTACCGCGAGATAGTTGACGGCCTCTACAAGATACTCCTC
GAAATAAGGAAGCTTGGAAGGCTTCCGGTCGTCAACTTTGCCGCCGGAGGAGTCGCCACCCCTGCAGACGCCGCGCTGAT
GATGCAGATGGGCATGGACGGCGTCTTCGTCGGCTCGGGAATCTTCAAGAGCTCCCAGCCTGAGAAGATGGCCAGGGCCA
TAGTCGAGGCCGTTAACCACTGGGACGAGCCGGACGTTCTCGTTGAGATAAGCAAGGAGATCGGCGAGCCGATGCGCGGC
CAGGAGATCGAGGAGCTCGAAGTTCGCCTTGAGGAGAGGGGCGTCTGA

Protein sequence :
MGKLHVIEAKGTDRLKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVSVMALHRVPADIRKAGGVARMAPIEKIQEIMDAV
TIPVMAKVRIGHVAEAKILEALGVDMIDESEVLTPSDPYFHIDKREFNVPFVCGNRNLGEAVRRIWEGAAMMRTKGEAGT
GNIIEAVRHVRLLRDNIALLQRMTDEQVYGVAEKFAEPYFRLAFEVREISGLPRHVLENEPIYGSYTYREIVDGLYKILL
EIRKLGRLPVVNFAAGGVATPADAALMMQMGMDGVFVGSGIFKSSQPEKMARAIVEAVNHWDEPDVLVEISKEIGEPMRG
QEIEELEVRLEERGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 4e-63 55
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-63 55
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-63 55