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Name : gabD1 (CVAR_0952) Accession : YP_004759379.1 Strain : Corynebacterium variabile DSM 44702 Genome accession: NC_015859 Putative virulence/resistance : Unknown Product : succinic-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1085198 - 1086679 bp Length : 1482 bp Strand : + Note : NAD-dependent aldehyde dehydrogenases DNA sequence : ATGCCTGATCAGACACTCCTCGCCCCGGAGCACCTCCAGACCACTGCACCCACCGAACTCTGGCTGGCGGGACGTCAGAC GGCGTCCTCGACCGGAAAGACCTTCCCCGTCCTCGACCCTGCCACCGGTGACGTGATCGCCCGCGTCGCCGATGCCTCCC TGGAGGACGCCACCGCCGCACTCGACGCCGCAGTCGACGCCTTCCCGCTGTGGTCGGCGTCCTCCCCGAGGCGCAGGACG GACGTCCTCACCCGCATCTTCGAGCTGGTCAGGGAGCGGACCGAGGACTTCGCCCGCACCATGACACTCGAGATGGGCAA GCCGCTGGCCGAAGCCAGGGGAGAGGTCGCCTACGGCAACGAGTACTTCCGCTGGGCGGCCGAGGAGGCTGTCCGCATCC CGGGCCGCTTCGGCACCGCCTCCCAGGGCAACGGGCACATGCTCATGACGAGGACGCCCGTCGGCCCGGTTCTCGCGATC ACCCCGTGGAACTTCCCGTTGGCTATGGCGACCCGCAAGATCGCCCCCGCGCTGGCCGCCGGATGTCCGATCATCGTGAA GCCGTCCTCGGACACACCGCTGACCCTGCTGCTGCTCGGTGAGGTCATCACGCAGGCGTTCGCGGAGTTCGACGTCCCCG CCGGTCTGTTCTCGGTCCTGCCGGGTCGGGGATCCGCGGCGATGTCAGAGCACCTCATGTCGGACCGACGACTCCGCAAA GTGACCTTCACCGGATCCACCCCGGTGGGTCGCACCCTGGTCCGTCAGTCCGCCGAGCACCTCCAGCGCACCTCCATGGA GCTGGGTGGCAACGCCCCGTTCGTCGTGGCGGCGGACGCGGACATCGACGCCGCCGTCTCCGGCGCGATGGTCGCGAAGA TGCGCAACGGCGGGCAGGTCTGCGTCGCGGCGAACCGTTTCCTCGTGGACACTTCGGTCGTCGAGGAGTTCACCACCGGT TTCCTGGCCGCGGTCGAGGGGATCCACCAGGGCAACGGCTTCGACGACGGCGTCACCCTCGGCCCCGTGATCACCGGTAG GCAGCGTGACGAGATCCACGAGCTGGTGGAGGACGCCGTGGCCGCCGGTGCACGACTGCTCACCGGTGGTGAGATCCCCG AGGGGCCGGGCAACTTCTACCCGCCGACGGTGCTCACGGATGTCCCCGCCGACGCCCGGATCCTCCGCGAGGAGATCTTC GGCCCGGTCGCCACCATCACCACCTTCGACAGCCTGGAGGAGGGGGTCGCGCGGGCCAATGACACCGAGTTCGGGCTCGC CGCGTACGGCTACGCCGGCGGTGTCGCGTCCGCGCAGTACCTCACGGAGAACCTGCAGGCCGGCATGGTCGCACTGAACC GGGGACAGCTCTCCGAACCGGCCGCCCCCTTCGGCGGCGTCGGACAGTCCGGCTTCGGCCGGGAGGGCGGTACCGAGGGC ATCGAGGAGTACCTCGATATCCGGTACATCGCGCTGCCGTGA Protein sequence : MPDQTLLAPEHLQTTAPTELWLAGRQTASSTGKTFPVLDPATGDVIARVADASLEDATAALDAAVDAFPLWSASSPRRRT DVLTRIFELVRERTEDFARTMTLEMGKPLAEARGEVAYGNEYFRWAAEEAVRIPGRFGTASQGNGHMLMTRTPVGPVLAI TPWNFPLAMATRKIAPALAAGCPIIVKPSSDTPLTLLLLGEVITQAFAEFDVPAGLFSVLPGRGSAAMSEHLMSDRRLRK VTFTGSTPVGRTLVRQSAEHLQRTSMELGGNAPFVVAADADIDAAVSGAMVAKMRNGGQVCVAANRFLVDTSVVEEFTTG FLAAVEGIHQGNGFDDGVTLGPVITGRQRDEIHELVEDAVAAGARLLTGGEIPEGPGNFYPPTVLTDVPADARILREEIF GPVATITTFDSLEEGVARANDTEFGLAAYGYAGGVASAQYLTENLQAGMVALNRGQLSEPAAPFGGVGQSGFGREGGTEG IEEYLDIRYIALP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 6e-86 | 47 |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 9e-75 | 44 |
