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Name : CVAR_0085 (CVAR_0085) Accession : YP_004758505.1 Strain : Corynebacterium variabile DSM 44702 Genome accession: NC_015859 Putative virulence/resistance : Unknown Product : transposase for insertion sequence element Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 104265 - 105113 bp Length : 849 bp Strand : + Note : Transposase and inactivated derivatives DNA sequence : GTGCTGTCAGACACACCCGCCCGCATCGCCGTGAGCACGTACTACGCCGTGAAAAGCCGTCCTGCCTCTGCCCGGTCCGT CCGAGACGACGAGGTCGCCGCTGCACTGCACTGCATCTACGCCGACAACTACTCCTGCTACGGCGCGCGGAAACTGTGGG CCGAGATCAACCGCGAAGGAACATTCGGCCACGTCGCCCGCTGCACCGTGGAACGGATCACGGGCCGTGAAGGTCTCCGC GGGATCCGCCGGCGGGTGAAGAAACCTGCCACACGCAGTGCCGACGCTGATGAGTGCCCGGATGATCTGGTCGACCGTGA CTTCGACGTGGAGTTCCCGAACATGTTGTGGGTCGCGGACATCACCTACATCCCCACCCGGGCCGGATGGGTGTACGCCG CGTTCGTCCTGGACGCCGCCACCCGTGAGATCGTCGGCTGGCAGGTCACCAACCACCTGCGGGCCTCGCTGGCCCGCGAT GCCCTCGACATGGCACTGTCTGCCCGCCTTCGGGCAGGCCAGGATGTGTCCGGGCTGATCCACCACTCGGACCGCGGAGT TCAATATCGGTCGGTGGCCTACGGCAAGTCGTTGGCGGACTCGAAGGTCGTCGCGTCGGTAGGGTCCAAGGGTGACTCCT ACGACAATGCGATGGCCGAGGCACTGAACTCGGTGTTCAAGGCTGAGCTGATCGACCGGCGAACATGGCCGGCGTTGACG GACGTCATCGTGGAGACATCGAAGTGGGTCGGGTGGTACAACACTCGGCGACTGCATTCAGCGGTCGGCTACGTGCCGCC GGTTCAGGCTCATCGTCAGCTGCTCGACAAGCAGGCTGTCGCGGCCTGA Protein sequence : MLSDTPARIAVSTYYAVKSRPASARSVRDDEVAAALHCIYADNYSCYGARKLWAEINREGTFGHVARCTVERITGREGLR GIRRRVKKPATRSADADECPDDLVDRDFDVEFPNMLWVADITYIPTRAGWVYAAFVLDAATREIVGWQVTNHLRASLARD ALDMALSARLRAGQDVSGLIHHSDRGVQYRSVAYGKSLADSKVVASVGSKGDSYDNAMAEALNSVFKAELIDRRTWPALT DVIVETSKWVGWYNTRRLHSAVGYVPPVQAHRQLLDKQAVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z4334 | NP_289559.1 | IS629 transposase | Not tested | OI-122 | Protein | 2e-37 | 46 |
| S4063 | NP_839232.1 | IS629 orfB | Not tested | SHI-2 | Protein | 3e-37 | 45 |
| unnamed | AAL67406.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 5e-43 | 44 |
| IS629 | CAI43840.1 | transposase for IS629 | Not tested | LEE | Protein | 6e-45 | 44 |
| ECO103_3585 | YP_003223443.1 | IS629 transposase OrfB | Not tested | LEE | Protein | 3e-44 | 44 |
| c5178 | NP_757026.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 3e-44 | 44 |
| IS629 | CAC37926.1 | transposase for IS629 | Not tested | LEE | Protein | 4e-44 | 44 |
| IS629 | CAI43821.1 | transposase for IS629 | Not tested | LEE | Protein | 4e-44 | 44 |
| IS629 | CAI43909.1 | transposase for IS629 1 | Not tested | LEE | Protein | 4e-44 | 44 |
| unnamed | AAL67398.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 1e-44 | 44 |
| ECO111_3721 | YP_003236061.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 3e-44 | 44 |
| ECO111_3776 | YP_003236111.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 3e-44 | 44 |
| c5213 | NP_757061.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 1e-44 | 44 |
| Z1198 | NP_286733.1 | transposase | Not tested | TAI | Protein | 1e-45 | 44 |
| Z1638 | NP_287141.1 | transposase | Not tested | TAI | Protein | 1e-45 | 44 |
| Z1221 | NP_286756.1 | transposase | Not tested | TAI | Protein | 2e-45 | 44 |
| Z1660 | NP_287162.1 | transposase for IS629 | Not tested | TAI | Protein | 2e-45 | 44 |
| APECO1_3499 | YP_854312.1 | transposase for IS629 | Not tested | PAI I APEC-O1 | Protein | 6e-44 | 43 |
| ORF_34 | AAZ04444.1 | putative IS629 transposase | Not tested | PAI I APEC-O1 | Protein | 5e-44 | 43 |
| c5167 | NP_757015.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 1e-26 | 42 |
| unnamed | CAD42083.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 3e-42 | 42 |
| CDCE8392_1958 | YP_005134489.1 | transposase-like protein | Not tested | Not named | Protein | 1e-31 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CVAR_0085 | YP_004758505.1 | transposase for insertion sequence element | VFG1602 | Protein | 2e-42 | 42 |
