Gene Information

Name : CVAR_0749 (CVAR_0749)
Accession : YP_004759175.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4604
EC number : -
Position : 876423 - 877178 bp
Length : 756 bp
Strand : -
Note : ABC-type sugar transport systems, ATPase components

DNA sequence : 
GTGATCTCCTTCGACAACGTCTCCCGCGCCTACAGCGACGAGGTCACCATCGGCCCCGTCAGCTTCGACATCCCCGCCGG
CGGCATGACTGCACTCGTCGGCCCCAACGGCGCCGGCAAGTCCACCCTGCTCACCATGGTCGGACGCCTCCAGAAGCCGG
ACACCGGCGCCATCACCGTCGGAGGCGAGGACGTGTTCACGACGCCTTCCGGGGAGGTCGCCAAGAAACTGTCCATCCTG
CGGCAGGAGAACCACTTCGTCACCCGCCTGACGGTGCGCCAGCTGGTGGGTTTCGGACGCTACCCGCACTCGCACGGTCG
CCTGAACGTCGAGGACGAGAAGCACATCACCGAGGCCATCGACTTCCTCAACCTCACCGACCTGGAGAACCGGTACCTCG
ACCAGCTCTCCGGCGGTCAGCGGCAGCGTGCCTATGTCGCCATGGTGCTGGCCCAGGACACCGACTACGTCCTGCTGGAC
GAGCCGCTGAACAACCTGGACATGAAGCACTCGGTCCAGATGATGAAGCAGCTGCGTCGAGCCTGCGACGAGCTGGGACG
CACCGTCGTCATCGTGCTCCACGACATCAATTTCGCCGCCCGCTACGCCGACCACATCTGTGCGATGGCCGACGGGCAGG
TGACCGTCTTCGGCACGCCGGAGGAGGTCATCCGGGACGAGGTGCTCTCCGGGATCTTCGGCACCCCGGTCAAGGTTCTG
CAGACCGAGGACGGCCCTCTCGCCAGCTATTTCTGA

Protein sequence : 
MISFDNVSRAYSDEVTIGPVSFDIPAGGMTALVGPNGAGKSTLLTMVGRLQKPDTGAITVGGEDVFTTPSGEVAKKLSIL
RQENHFVTRLTVRQLVGFGRYPHSHGRLNVEDEKHITEAIDFLNLTDLENRYLDQLSGGQRQRAYVAMVLAQDTDYVLLD
EPLNNLDMKHSVQMMKQLRRACDELGRTVVIVLHDINFAARYADHICAMADGQVTVFGTPEEVIRDEVLSGIFGTPVKVL
QTEDGPLASYF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-34 44
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-39 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-39 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-39 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-39 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CVAR_0749 YP_004759175.1 ABC transporter ATP-binding protein BAC0164 Protein 7e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CVAR_0749 YP_004759175.1 ABC transporter ATP-binding protein VFG1042 Protein 6e-40 42