Gene Information

Name : fadD2 (CVAR_0727)
Accession : YP_004759151.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Unknown
Product : acyl-CoA synthetase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG0318
EC number : -
Position : 853460 - 855049 bp
Length : 1590 bp
Strand : -
Note : Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II

DNA sequence :
ATGCCCGTGTCCAGTGACCAGAGCGACTTCACCGTCCCCCCGGTGGGCCTCTACGACTACATCTACGGCTCGCTGGCCCC
GGAGGACGAGGACCGCGTCGCCGTGGTCGATCTGGCGGACGGCACCGAATCCACGTTCGCCACGCTGCGCAGTCACGTGG
ACGCCGCGGCCGGTTGGCTCCACCGTTTCGGGGTGCGCACCGGGGACGTCGTCGCGCTGCAGTGCCCCAACTCCGAGAAT
TTCATCGTCGCCGCTCACGCGGTGTGGCGTCTCGGTGCGGTTCTGACCCCCGTTCCGCTGCTCTCCACCCCGGAGACCGT
CGCCCACCAGATCAAGGACTCGGGCGCGACGCTGCTGCTGACCCTCGCCGGCTTCGGCGACGGTGGTGAGGAGGCCGCGG
AGCTCGCCGGGCTGCCCGCCGACCGGCTGATCCACCTCGACGACTCCCGCGGACTCAAGCAGATGTACGCCGAGCGCAAC
ACTCCCCCCGAGGTCAGCTTCGATCCCGCCACCCACCCTGCCGCGCTGCCCTATTCCTCGGGCACCACCGGACTGCCGAA
GGGTGTGAAGCTCACCCACGGGAACCTGGTGGCGAACATCGCCCAGATCGAGACCGCCGGTGTGGTCACGCGGGAGGACA
CGATCTTCGGCGTCCTGCCGTTCTTCCACATCTACGGACTCACCGTGCTGGCCAATGCGGCGATGCGGCTGCGTGCCCGG
CTGCTGACCTCCCCCCGGTTCCAGCTGAACACCTTCCTCGCCGCCCACCAGGATCACAAGGTCACCTTCACCTTCATCGC
CCCGCCCGTGGCGGTCGCACTGGCGAAGGACCCGGCTGTCGACGGTCACGACCTCTCCGCTCTGCGTGGCGTGTTCAGTG
GTGCCGCTCCGCTCGACGACGACCTCGCACGCGCCGTGGAGAAGCGGCTCGACATCCGCGTCTACCAGGGCTACGGTCTC
ACCGAAGCCAGCCCGGTGACGCACATGAACACCGACGGGAACCTCTCTCGTGGTTCCATCGGCAGGCCGGTCGCCGGCAC
CGAGCACAAGATCGTCGACCCGGAGTCCTTCGAGGAGATCCCGGTCCCGTCCGAGGGCGTCAGTGCCAACGGCGAACTGT
GGGTCCGCGGACCCCAGGTGATGTCCGGCTACCTGGGTGATGAGGAGGCCACCGCCGCCACCCTGCCCGGTGACGGCTGG
CTGCGCACCGGAGATATGGCGCGCCAGGATGACCGGGGCGACGTCTATATCGTCGACCGGCTCAAGGAGATCATCAAGTA
CAAGGGCTACCAGGTTCCTCCGGCGGAGCTCGAGGCTCTGCTGCTGACCCTGCCTGATGTGGCGGACGCCGCGGTCGTCG
GTGTCGACGACCCGGCCACCGGCGCGGAGATCCCCAAGGCCTACGTGGTGCGACAGGCGGTCGCCGAGGGCGACACCCGC
TCCGACGAGGAGGTCGCCACCGCCATCGAGGACGCCGTCAACGCCCGGGTGGAGCCCTACAAGAAGATCCGTGCACTGGA
GTTCCTGTCTGAGGTGCCGAAGTCGGCCACCGGCAAGATCCTGCGACGCACGCTGCGCGACCGGGGCTGA

Protein sequence :
MPVSSDQSDFTVPPVGLYDYIYGSLAPEDEDRVAVVDLADGTESTFATLRSHVDAAAGWLHRFGVRTGDVVALQCPNSEN
FIVAAHAVWRLGAVLTPVPLLSTPETVAHQIKDSGATLLLTLAGFGDGGEEAAELAGLPADRLIHLDDSRGLKQMYAERN
TPPEVSFDPATHPAALPYSSGTTGLPKGVKLTHGNLVANIAQIETAGVVTREDTIFGVLPFFHIYGLTVLANAAMRLRAR
LLTSPRFQLNTFLAAHQDHKVTFTFIAPPVAVALAKDPAVDGHDLSALRGVFSGAAPLDDDLARAVEKRLDIRVYQGYGL
TEASPVTHMNTDGNLSRGSIGRPVAGTEHKIVDPESFEEIPVPSEGVSANGELWVRGPQVMSGYLGDEEATAATLPGDGW
LRTGDMARQDDRGDVYIVDRLKEIIKYKGYQVPPAELEALLLTLPDVADAAVVGVDDPATGAEIPKAYVVRQAVAEGDTR
SDEEVATAIEDAVNARVEPYKKIRALEFLSEVPKSATGKILRRTLRDRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1475 YP_001800869.1 acyl-CoA synthetase Not tested Not named Protein 4e-128 56