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Name : CVAR_0560 (CVAR_0560) Accession : YP_004758983.1 Strain : Corynebacterium variabile DSM 44702 Genome accession: NC_015859 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4166 EC number : - Position : 647966 - 649639 bp Length : 1674 bp Strand : - Note : ABC-type oligopeptide transport system, periplasmic component DNA sequence : ATGAGCCGCACCAGGCTCCCCGGTCACATACCCCGCGTCATCACGGCACTGCTCACCAGCGTGGCCGTGGTCTTCGGCCT CACCGCCTGTATGAACGACACCTCCAAGGTGCCGGACGACTACATCACCTTCTTCGGTAGTGAGCCGCAGAACCCCTTGA TCCCGACCAACACCCAGGAGATCAACGGCGGCCAGGTGATCGAGAACCTCTTCACCGGCCTCGCCCGGTACACCCCGGAG GGCGAAGCACGCAACGCGGTCGCTGAATCGATCACCCCGAACGAAAACTCGACCTCCTTCCGCATCAAGCTGCGGGACTG GAGCTTCACCAACGGTGAGAAGATCACCTCGGACTCCTTCATCGACGCCTGGAACTGGGCCGTCGACCCGGCCAATGCCC AGTTGCAGTCCGCCTTCTTCGCCCCGATCAAGGGTTACACCGAGGTCGCCGGGGAGACGGACGCCGACGGCAACGTCATC ACCGAACCCACCGCAGACACCATGTCCGGCCTGACGAAGATCAGCGACACCGAATTCACCGTCACGCTCTCCGCGCCGGA CTCGACCTTCCCGCTGCTGCTCGGTTACTCCTCCTTCGTCCCGCTGCCCTCGGTCTTCTTCGACGACCCGAAGAGCTTCG GCGAGCACCCGGTCGGCAACGGCCCGTACATGATGGACGGCCAGGACGCCTGGCAGCACAACATCGCGATCTCCCTGAAG AAGAACCCGGACTACCCCGGTGAGGACGTCCCGAAGAACCCGGGCATCGCCTTCATCATGTACTCCTCCCCCACCACGGC CTACGCCGACCTGCAGTCCGGCGACCTCGACCACATGCGGGAGACTGTCGCCCCTGAGGCCTACCCGACCTACACCGAGG ACTTCCCGGACTCCCACGACGACAAGCCGTACGCGGCAATCCAGAACTTCACCATCCCGGAGAACCTGCCCGGCTTCGCC ACGGATGAGGAGGGACGCCTGCGCCGTGCGGCGATCTCCATGTCCATCGACCGGCAGATGATCATCGACAAGGTGTACTT CGGCGCCCGCCAGATCGCCGAGGACTTCGGCGCCCCGACCCTGGCCGGCGGTCTGCCGGACATCAAGGGCAAGGAGGTCC TGACGTACCAGCCGGAGAAGGCGAAGGAGCTGTGGGAGGAGGCGAACAAGATCAACCCGTGGGGCGGTCAGAAGTTCCAG ATCGCCTACAACTCCGACGGCGGCCACCAGCAGTGGGTGGAGGCGGTGACCAACAGCGTCCGCCAGAACCTGGGCATCAA TGCCACCGGCAAGGCCTACCCGACGTTCAAGGCCATGCGTGACGACGTCGTCAACGGCACCGTCGGCGCGGCTTTCCGCT CCGGCTGGACCGCCGACTACCCGTCCATCGCGTCCTTCCTCGTCTCGAACTACCGCACCGGCGATTCCGCCAATGACGGC GACTACTCCAACAAGGACTTCGACAAGCTCCTGGCCGAGGCTGCGGCACAGTCCAGCCCCGAAGAGGCACAGCCGATCTA CAACGACGCGCAGGAGATCCTCATGCAGGACCTGCCGCAGATCCCACTGTGGTACTATTCCGCCTCCACCGCCTGGAACC CGGACCTGAAGAACGTCGAGTCCGGTTGGCTCGGCATGCCCGTGTACACCGAGATCACCAAGGATGTGAACTGA Protein sequence : MSRTRLPGHIPRVITALLTSVAVVFGLTACMNDTSKVPDDYITFFGSEPQNPLIPTNTQEINGGQVIENLFTGLARYTPE GEARNAVAESITPNENSTSFRIKLRDWSFTNGEKITSDSFIDAWNWAVDPANAQLQSAFFAPIKGYTEVAGETDADGNVI TEPTADTMSGLTKISDTEFTVTLSAPDSTFPLLLGYSSFVPLPSVFFDDPKSFGEHPVGNGPYMMDGQDAWQHNIAISLK KNPDYPGEDVPKNPGIAFIMYSSPTTAYADLQSGDLDHMRETVAPEAYPTYTEDFPDSHDDKPYAAIQNFTIPENLPGFA TDEEGRLRRAAISMSIDRQMIIDKVYFGARQIAEDFGAPTLAGGLPDIKGKEVLTYQPEKAKELWEEANKINPWGGQKFQ IAYNSDGGHQQWVEAVTNSVRQNLGINATGKAYPTFKAMRDDVVNGTVGAAFRSGWTADYPSIASFLVSNYRTGDSANDG DYSNKDFDKLLAEAAAQSSPEEAQPIYNDAQEILMQDLPQIPLWYYSASTAWNPDLKNVESGWLGMPVYTEITKDVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDBH8_0922 | YP_005160014.1 | putative peptide transport system secreted protein | Not tested | Not named | Protein | 1e-105 | 44 |
