Gene Information

Name : CVAR_0557 (CVAR_0557)
Accession : YP_004758980.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 644374 - 645954 bp
Length : 1581 bp
Strand : -
Note : ATPase components of various ABC-type transport systems, contain duplicated ATPase

DNA sequence :
GTGGTGGGCGAGTCCGGCTCGGGCAAGTCCACCACCGCGATGGGCATCATGGGGCTGCTGCCCGGTGGCGGCCAGGTCAC
CGACGGCACCATCACCTTCGACGGCCGCGACATCACCCACCTCTCCGAGCGTGAGTTCACCGGGATCCGCGGTTCCGAGG
TCGGCCTGGTCCCCCAGGACCCGATGAGCAACCTCAACCCGGTGTGGAGCATCGGCCACCACATCAAGGAGGCGCTGAAG
GCCAACAACGTCGCCTCCGGTTCCGCGGCGCACGACCGGGCCGTCGAGCTCATGGAGGAGGCCGGGCTCACCGAGGCAGA
CCGACGCATCGACCAGTTCCCGCACCAGTTCTCCGGTGGTCAGCGCCAGCGTGCACTCATCGCTTGTGGTCTGGCGGCGC
GTCCGAAGCTCCTCATCGCCGATGAACCGACCTCCGCGCTCGACGTGACGGTCCAGCAGCAGATCCTCGACCACCTCCAG
GAGCTGACCGAGGAGCTCGGCACCGCCGTGCTGCTGATCACCCACGACCTCGGCCTGGCGGCGGAGCGCGCCCAGCGCAT
CATCGTCATGAGCCAGGGCCGGATCGTGGAGGCTGGCCCGTCGCTGGAGATCCTGCAGAACCCGCAGCACCCGTACACGC
AGAAGCTCGTCGCGTCCGCCCCGTCGGTCACTGCGCGTCGCATCGACCTGGACATCGAGGAACCCCTCCGGGATGCCGGG
GAGGACGCTGCGGTGGACGCTGCGGTGGACGCTGCGGTGGACGCTGCGGATGAGGCGTCCCCCAACCTCATCGAGGTCTC
CGGTCTGACGAAGATCTACCAGGTTCCCGGTGACAGGCCCTGGCGGAAGAAGGACTTCACCGCCGCCGAGGACGTGAACT
TCTTCCTGCGCAGAGGCCATACCCTCGCGCTCGTCGGCGAATCCGGCTCGGGCAAGTCCACAGTCGCGCAGATGGTGCTC
GGTCTGCTGGAGCCGACCAGTGGCACGGTGACCTTCGACGGCACCGACATCACCCACCTGGACCGGGCCGGTGAACTGGC
GTTCCGGCGCCGCGTCCAGCCGGTGTTCCAGAACCCCTACGGATCGGTGGACCCGATGTACTCGGTGTTCAACACCATCG
CCGAGCCGCTGAAGATCCACAAGGTCGGTTCGAAGAAGGAGCAGGAGGCCCGCGTCCGCGAACTGCTGGACCTGGTGGCC
ATGCCGTCGTCGATGCTGGCCCGCTACCCCGGGGAGCTCTCCGGCGGTCAGCGTCAGCGTGTGTCGATCGCCCGTGCGCT
GGCGCTGGGCCCGGAGGCACTGATCCTCGACGAGGCGGTCAGTGCGCTCGACGTGCTGGTGCAGTCCCAGGTGCTGTCCC
TGCTCAATGATCTGCAGGAGGAGATGGGCCTGACTTATCTCTTCATCACCCACGATCTCGCGGTGGTCAAGCAGATCGCC
GACGAGACGCTGGTCATGAAGTCCGGCCGGATCGTCGAACGTGGGGAGACGGACGACCTGTTCGACAACCCTGAGCAGGA
GTACACCCGTCGGCTCATCCAGTCGATCCCGGGTGGCACGCTGCCGCTGTACCAGGGTTAG

Protein sequence :
MVGESGSGKSTTAMGIMGLLPGGGQVTDGTITFDGRDITHLSEREFTGIRGSEVGLVPQDPMSNLNPVWSIGHHIKEALK
ANNVASGSAAHDRAVELMEEAGLTEADRRIDQFPHQFSGGQRQRALIACGLAARPKLLIADEPTSALDVTVQQQILDHLQ
ELTEELGTAVLLITHDLGLAAERAQRIIVMSQGRIVEAGPSLEILQNPQHPYTQKLVASAPSVTARRIDLDIEEPLRDAG
EDAAVDAAVDAAVDAADEASPNLIEVSGLTKIYQVPGDRPWRKKDFTAAEDVNFFLRRGHTLALVGESGSGKSTVAQMVL
GLLEPTSGTVTFDGTDITHLDRAGELAFRRRVQPVFQNPYGSVDPMYSVFNTIAEPLKIHKVGSKKEQEARVRELLDLVA
MPSSMLARYPGELSGGQRQRVSIARALALGPEALILDEAVSALDVLVQSQVLSLLNDLQEEMGLTYLFITHDLAVVKQIA
DETLVMKSGRIVERGETDDLFDNPEQEYTRRLIQSIPGGTLPLYQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-148 63