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Name : clpB2 (CVAR_0506) Accession : YP_004758928.1 Strain : Corynebacterium variabile DSM 44702 Genome accession: NC_015859 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 585837 - 588461 bp Length : 2625 bp Strand : + Note : ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGTTCGAGAGGTTCACTGACCGGGCGCGGCGCGTCGTCGTGCTGGCGCAGGAGGAAGCCCGCGCGCTCAACCACAACTA CATCGGTACCGAGCACATCCTGCTCGGTCTGATCCACGAGGGTGAGGGCGTCGCCGCCAAGGCCCTGGAATCCATGGGAA TCTCCCTGGAGGCCGTCCGTACCGAGGTCGAGGACATCATCGGTACCGGTGGCCACCCGCCGAGCGGCTACATCCCCTTC ACCCCGCGTGCGAAGAAGGTGCTGGAGCTCGCCCTGCGCGAGGCTCTGCAGCTCGGACACAAGTACATCGGAACCGAGCA CATCCTGCTCGGTCTGATCCGCGAGGGTGAGGGCGTCGCCGCCCAGGTCCTGGTCAAGCTCGGTGCTGACCTGTCCCGCG TCCGCCAGCAGGTCATTCAGCTGCTGTCCGGTTACGAGGGTGGCGAGCCCGAGAGTGAGCAGGCCTCCGACGAGCCGGCA GGTGCCGGTGTCGGTCCCGGCGACGGTGCCCCGTCCGCTCCGAGCGGCAAGCCCGGTCAGAAGTCGAACTCCCTGGTCCT CGACCAGTTCGGCCGCAACCTGACCCAGGCTGCCAAGGACGGCAAGCTTGATCCGGTGGTCGGTCGCGGCAAGGAGATCG AGCGCATCATGCAGGTGCTCTCACGCCGTACCAAGAACAACCCGGTGCTCATCGGCGAGCCCGGCGTCGGTAAGACGGCC GTCGTCGAGGGCCTGGCCCTCGACATCGTCAACGGCAAGGTCCCCGAGACCCTGAAGGACAAGCAGCTCTACTCGCTGGA CCTCGGTTCCCTCGTCGCCGGTTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAAGGTGCTCAAGGAGATCAACC AGCGCGGTGACATCATCCTGTTCATCGACGAGATCCACACCCTCGTCGGTGCGGGTGCCGCTGAGGGTGCGATCGACGCC GCCAGCATTCTCAAGCCGAAGCTGGCCCGTGGTGAGCTGCAGACCATCGGCGCCACCACGCTCGACGAGTACCGCAAGCA CATCGAGAAGGACGCTGCCCTCGAGCGTCGTTTCCAGCCCGTCCAGGTGCCGGAGCCGAGCGTCGAGATGACCGTCGAGA TCCTCAAGGGTCTGCGCGACCGCTACGAGGCGCACCACCGTGTGTCCATCACCGACGGTGCGCTCGCCGCCGCCGCGCGT CTGTCCGACCGGTACATCAACGACCGTTTCCTACCGGACAAGGCCGTCGACCTCATCGACGAAGCCGGCGCCCGTATGCG TATCAGGCGGATGACCGCGCCGAAGGCGATCCAGGACGTCGACGACAAGATCGCCGAGGTCCGTCGGGCCAAGGAAGCCG CGATCGACGACCAGGACTTCGAGAAGGCAGCGTCCCTGCGCGACGACGAGCGTCAGCTCTCCGAGGAGCGCGCCGAGAAG GAGAAGCAGTGGCGCGCCGGTGAACTCGACGACGTCGCCGAGATCGGTGAGCAGGAGATCGCCGAGGTTCTCGGTGCCTG GACCGGTATCCCCGTCGTCCAGCTCACCGAGGAGGAGACCACCCGTCTGCTCCACATGGAGGACGAGCTGCACGAGCGGA TCATCGGACAGGAGGACGCCGTCAAGGCGGTCTCCCGCGCGATCCGCCGTACCCGTGCCGGCCTGAAGGACCCGAAGCGT CCCTCCGGTTCCTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACGGAGCTGTCCAAAGCGCTCGCCGAGTTCCTCTT CGGCGACGAGGATTCGCTCATCTCCATCGACATGGGTGAGTTCCACGACAAGTTCACGGCGTCCCGCCTCTTCGGCGCTC CCCCCGGATACGTCGGTTACGACGAGGGTGGCCAGCTCACCGAGAAGGTGCGCCGCAAGCCGTTCTCCGTGGTCCTGTTC GACGAGATCGAGAAGGCTCACTCCGAGATCTACAACACCCTGCTGCAGGTGCTCGAGGAAGGCCGTCTCACCGACGGTCA GGGTCGGGTCGTGGACTTCAAGAACACGGTTTTGATCTTCACCTCGAATCTCGGCACGAGGGACATCTCGAAGGCCGTCG GCATGGGCTTCTCCTCGACCGGCGAGTCGGATGAGAAGGGTCAGTACGACCGGATGAAGTCGAAAGTCAACGACGAGCTG AAGAAGCACTTCCGCCCGGAGTTCCTCAACCGTATCGACGACATCGTGGTCTTCCACCAGCTCACCCAGGCACAGATCGT CGAGATGGTCGACCTGCTGCTCGGTCGGCTGCGTAAGGCACTGTCCGACAAGGACATGGCCCTGGAGGTGTCCGACAAGG CGAAGGACCTGCTGGCCAAGCGTGGCTTCGACCCGGTGCTCGGTGCCCGCCCGCTGCGTCGCACGATCCAGCGCGAGATC GAGGACCACCTGTCCGAGGAGATCCTCTTCGGCAACGTGGCCTCCGGCGAGATCGTCACCGTCGACGTAGACAACTGGGA CGGCGGCCCCCGGACCGAGGGTGCGACCTTCGTCTTCGGGTCCAGGCCGAAGCCGGCTCCGGTCGTCATCCCCGAAGTCG AGGACGAGGCCGAGACCGCCGACGCCACGGCGGATGCCGGTGCCGACACCGGCGACGCCCAGTAG Protein sequence : MFERFTDRARRVVVLAQEEARALNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRTEVEDIIGTGGHPPSGYIPF TPRAKKVLELALREALQLGHKYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVIQLLSGYEGGEPESEQASDEPA GAGVGPGDGAPSAPSGKPGQKSNSLVLDQFGRNLTQAAKDGKLDPVVGRGKEIERIMQVLSRRTKNNPVLIGEPGVGKTA VVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDA ASILKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVEMTVEILKGLRDRYEAHHRVSITDGALAAAAR LSDRYINDRFLPDKAVDLIDEAGARMRIRRMTAPKAIQDVDDKIAEVRRAKEAAIDDQDFEKAASLRDDERQLSEERAEK EKQWRAGELDDVAEIGEQEIAEVLGAWTGIPVVQLTEEETTRLLHMEDELHERIIGQEDAVKAVSRAIRRTRAGLKDPKR PSGSFIFAGPSGVGKTELSKALAEFLFGDEDSLISIDMGEFHDKFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLF DEIEKAHSEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTRDISKAVGMGFSSTGESDEKGQYDRMKSKVNDEL KKHFRPEFLNRIDDIVVFHQLTQAQIVEMVDLLLGRLRKALSDKDMALEVSDKAKDLLAKRGFDPVLGARPLRRTIQREI EDHLSEEILFGNVASGEIVTVDVDNWDGGPRTEGATFVFGSRPKPAPVVIPEVEDEAETADATADAGADTGDAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 86 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB2 | YP_004758928.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 58 |
| clpB2 | YP_004758928.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 7e-152 | 51 |
| clpB2 | YP_004758928.1 | ATP-dependent Clp protease ATP-binding subunit | VFG2084 | Protein | 1e-98 | 42 |
