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Name : lysS (CVAR_0502) Accession : YP_004758924.1 Strain : Corynebacterium variabile DSM 44702 Genome accession: NC_015859 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 578806 - 580428 bp Length : 1623 bp Strand : + Note : Lysyl-tRNA synthetase (class II) DNA sequence : ATGACCGTGACTGACCAGAAGCAGAATCCCCAGACCACAGACGACGCAGCCGCCGCCGACCTCCCTGAGCAGCTGAAGAT CCGCCGCGAGAAGCGTGCGCGCCTGCTGGCCGAGGGGAAGGACGCCTACCCGGTCGTCGTCGACCGCACCCGCACCCTCT CCGAGATCCTCGCGGCCTACGCGGTTCTCCCGAAGGATGAGGAGGAGGCTGCCGCCGTCGAGCGCGTCGAGGGCGTCACC TATCTCGCGCCGGGTGAGGAGACCACCGACGAGGTCGGCGTCGCCGGGCGCGTCATCTTCGTACGCAACACCGGCAAGCT CGCCTTCGCCCGGCTGCAGGAGGGCGACGGCACCCAGATGCAGGCCATGCTGTCGCTGGCCGAGGTGGGGGAGGACGCCC TGGCGTCCTGGAAGACCGACGTCGACCTCGGTGACATCGTCTTCGTCCACGGCCGGGTCGTGGCCTCGAAGCGCGGTGAG CTCTCCGTGATGGCCGACTCCTGGTCCATGGCCTCCAAGTCGCTGCGTCCGCTCCCGGTCGCGCACAAGGAGATGAGTGA GGACACCCGCATCCGCCACCGCTACACCGACCTCATCATGCGCGAACAGGCCCGCACCAACGCCATGACCCGTATCAAGG TCATGCGTGCACTGCGCAACGCCCTGGAGCGCCGCGGCTTCCTCGAAGTCGAGACCCCGATGCTGCAGACCCTGCACGGC GGTGCCGCTGCCCGCCCCTTCGAGACGCACTCCAACGCCCTCGACATCGACCTCTACCTGCGCATCGCCCCGGAGCTCTA CCTCAAGCGCTGCGTGGTCGGCGGCATCGACAAGGTCTTCGAGGTCAACCGCAACTTCCGCAATGAGGGCGTGGATTCCT CCCACTCCCCGGAGTTCGCCATGCTGGAGACCTACCAGGCGTACGGCACCTACGACACCGGTGCGCAGCTGATCCACGAC ATCATCCAGGAGATCGCGGTCGAGGTCTTCGGTTCCACCACCGTCACGCTCGTCGACGGCACCGGATACGACTTCGGCGG CGAGTGGCGTGTCATGGAGATGTACCCCTCCCTCAACGAGGCGCTGGGCCGGAAGTTCCCGGAGCAGACCGCGGTCGCTG AAGTCACCATCGATTCCACCGTCGAGGAGCTCAAGGCACTGGCCGAGGACATCGGCCTGGTTGTCCCGCCGAAGGGTGGC TGGGGACACGGCAAGCTCGTCGAGGAGATCTGGGAGTACCTGTGCGAGGACCAGCTTTACGGGCCCGTCTTCGTCCGCGA CTTCCCGGTGGAGACCTCCCCGCTGACCCGTCAGCACCGTTCCAAGCCCGGTGTGGCCGAGAAGTGGGACCTCTACGTCC GTGGCTTCGAGCTGGCCACCGGCTACTCCGAGCTTGTCGACCCGGTCATCCAGCGTGAGCGCTTCGAGGACCAGGCCCGC CTGGCCGCCGACGGCGACGATGAGGCCATGGTGCTCGACGAGGACTTCCTCGCCGCGATGGAGCAGGGAATGCCGCCGAC CTCCGGCAACGGCATGGGCATCGACCGACTTCTCATGGCCCTGACCGGCCTCGGAATCCGTGAGACCGTGCTCTTCCCGA TGGTCAAGCCAGAACGTTCCTGA Protein sequence : MTVTDQKQNPQTTDDAAAADLPEQLKIRREKRARLLAEGKDAYPVVVDRTRTLSEILAAYAVLPKDEEEAAAVERVEGVT YLAPGEETTDEVGVAGRVIFVRNTGKLAFARLQEGDGTQMQAMLSLAEVGEDALASWKTDVDLGDIVFVHGRVVASKRGE LSVMADSWSMASKSLRPLPVAHKEMSEDTRIRHRYTDLIMREQARTNAMTRIKVMRALRNALERRGFLEVETPMLQTLHG GAAARPFETHSNALDIDLYLRIAPELYLKRCVVGGIDKVFEVNRNFRNEGVDSSHSPEFAMLETYQAYGTYDTGAQLIHD IIQEIAVEVFGSTTVTLVDGTGYDFGGEWRVMEMYPSLNEALGRKFPEQTAVAEVTIDSTVEELKALAEDIGLVVPPKGG WGHGKLVEEIWEYLCEDQLYGPVFVRDFPVETSPLTRQHRSKPGVAEKWDLYVRGFELATGYSELVDPVIQRERFEDQAR LAADGDDEAMVLDEDFLAAMEQGMPPTSGNGMGIDRLLMALTGLGIRETVLFPMVKPERS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 0.0 | 78 |
