Gene Information

Name : fadD5 (CVAR_0417)
Accession : YP_004758838.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Unknown
Product : acyl-CoA synthetase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG0318
EC number : -
Position : 489766 - 491394 bp
Length : 1629 bp
Strand : +
Note : Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II

DNA sequence :
GTGTCCACCACACCCAGCCGTTTCCCCGAGATCGTCATTCCCGACGAGACCATCTACCAGACTCTCTTCGGGTCGCTCAC
CGAGGACCAGCGCACCCGCCCGGCGATCACCGACAGCGCCACCGGTCAGGAAGTCTCCTACGGGGAACTGCAGGACATGG
TGGACGCCACCGCCGGAGCACTGGCCGCCCGCGGCGTCGGGAAGGGGTCGGTCGTGGGGCTCCACGCGCCGAACAGCCTC
GCCTTCGCCGTCGCCTTCCACGGCATCATGCGCGCCGGGGGAACGGTCACCACTCTCGGTTCGCTGCTCATACCCTCCGA
TATCGACAAGCAGCTGCAGCAGGCCGGTGCGTCCCACCTGCTCACCATGAAGGCCCTGGGGGACGCCGGGATCACCGGTG
CCGCGTCCGCCGGTCTCCCCGCGGAATCCGTTATCGTCCTCGACGATCCCGAGGCCGGCCAGGCGTCCCTCATCGCCGAG
GGTCGTCCGGCACCGGAGGTCGATCTCGACCCCGCCACGGACATTGCCGTGATCCCCTTCTCCTCGGGCACCACCGGCAT
GGCCAAGGGTGTGAAGCTCAGCCACCGCAACCTGGTCGCGAACATGTACCAGATCGGCGTCACCCTCGAGGTCTCCGGGG
TCGACCACGACTGGACCATGCTTGCGGTGCTCCCGTTCTTCCACATCTACGGGATGAACTCGCTGCTCAACGCCTCGCTG
CTCCACCGGATGCACCTGGTGACCATGCCGACCTTCGATCTGGTGAAGTTCCTGGCGGCCATCGAGAAGTACCGGGTGGA
CCTGACCTACATCGCCCCGCCGATCGCCGTCGCCCTGGCGAAGCACCCGGTGGTCGCCGACTACGATCTCTCCAGCATGA
AGCACATGGTCTCCGGTGCGGCCGCACTCGACGGTGATCTCGCGGACTCCGTGTCCGGACGTATCGGGTCCACTGTCGCG
CAGGGCTACGGCATGACGGAGACCTCGCCCGTGACCCACTGTGCGGTTCTCGGTGAGACCCCGGCGGCGTCCATCGGGCA
CCCCGTGTCCAATACCGAGGCGAAGGTCGTCGACGTCTCCGATGATTCCCTGCCCGAGATCACCGCCCCGGATAGTGACG
ACCCGGAGGTGCGCTCGAAGTCCGGTGAGTTGTGGATCCGTGGACCGCAGGTCATGGTCGGTTACCTGGACAACGAGGAG
GCCACCGCGCGGACCATCACCCCCGAGGGATGGCTGCGGACCGGCGACATCGTGGACCTCGACCGCGACGGCAACGTCTA
CGTCGTCGACCGGATGAAGGAACTCATCAAGTACAAGGGCTACCAGGTGGCCCCGGCAGAGCTCGAGGCCCTGCTGCTCT
CCCACCCGGATATCGCCGACGCCGGTGTCGTCGGTGTCCTGCGGGAGTCCGACGGTGAGGAGGTCCCCCGGGCCTTCATC
GTCCCGCAGGTGCGCGAGGGGTCACCGGTGAAGGTCGACGCCGAGGAACTCATGGGCTGGGTCGCCGAGCAGGTGACCCC
GTACAAGAAGATCCGCTACGTCGACATCGTCGAGGCGATCCCGAAGTCCAACACCGGAAAGATCCTGCGCAAGGACCTCA
AGGCGGTCCCGCTGCAGGTGACCGCCTAG

Protein sequence :
MSTTPSRFPEIVIPDETIYQTLFGSLTEDQRTRPAITDSATGQEVSYGELQDMVDATAGALAARGVGKGSVVGLHAPNSL
AFAVAFHGIMRAGGTVTTLGSLLIPSDIDKQLQQAGASHLLTMKALGDAGITGAASAGLPAESVIVLDDPEAGQASLIAE
GRPAPEVDLDPATDIAVIPFSSGTTGMAKGVKLSHRNLVANMYQIGVTLEVSGVDHDWTMLAVLPFFHIYGMNSLLNASL
LHRMHLVTMPTFDLVKFLAAIEKYRVDLTYIAPPIAVALAKHPVVADYDLSSMKHMVSGAAALDGDLADSVSGRIGSTVA
QGYGMTETSPVTHCAVLGETPAASIGHPVSNTEAKVVDVSDDSLPEITAPDSDDPEVRSKSGELWIRGPQVMVGYLDNEE
ATARTITPEGWLRTGDIVDLDRDGNVYVVDRMKELIKYKGYQVAPAELEALLLSHPDIADAGVVGVLRESDGEEVPRAFI
VPQVREGSPVKVDAEELMGWVAEQVTPYKKIRYVDIVEAIPKSNTGKILRKDLKAVPLQVTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1475 YP_001800869.1 acyl-CoA synthetase Not tested Not named Protein 4e-111 50