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Name : clpB1 (CVAR_0381) Accession : YP_004758802.1 Strain : Corynebacterium variabile DSM 44702 Genome accession: NC_015859 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.92 Position : 452043 - 454613 bp Length : 2571 bp Strand : + Note : ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGAGCAGTTTCACCCCCACCACCCGTACCCAGGAGGCCATGCAGGCCGCACTGCAGTCTGCCTCGGCGAAGGGCAATCC GGACATCCGGCCCGCCCACCTGCTGGTCGCGATCCTCGAGCAGGAGGATTCCATCGCCCGCCCGGTCCTCCAGGCTGCCG GTGTGGACGCTGACGGCGTCCTCGCCGACGCCCGCGACCTCGTCGCCGGCTACGCCACCGCCGCCGGCGACGGCCTGGCC AACCCGAACTTCAACCGGGACGCACTCAACGCCCTGACCGCGGCCCAGGAACTCGCCGCCGAACTCGGCGACACCTACGT CTCCACCGAGGTACTGCTCGCCGGTATCGCCAAGGGTTCCGGGGACGCCGCCGAGGCGCTGCAGAACCGTGGCGGCACCT TCGAGGCCGTCCGCGGCGCCTTCGAGTCCGTCCGTGGCAACCGCAAGGTCACCACCGAGGAGCCCGAAGGCCAGTTCCAG GCCCTGGAGAAGTACTCCACCGACCTCACCGCCCGCGCCCGCGAAGGCAAGATCGACCCGGTCATCGGCCGCGACCAGGA GATCCGTCGCGTCGTCCAGGTGCTGAGCCGCCGCACGAAGAACAACCCGGTCCTCATCGGCGAGCCCGGCGTCGGCAAGA CCGCCATTGTTGAAGGCCTCGCCCGCCGTATCGTCGCCGGCGACGTGCCCGAGTCGCTGCGCGGCAAGAAGCTCATCTCC CTCGACCTCGGTTCCATGGTCGCCGGTGCGAAGTACCGCGGTGAGTTCGAGGAACGCCTCAAGGCCGTCCTCGACGAGAT CAAGGAGGCCGAGGGCGAGGTCATCACCTTCATCGACGAGCTGCACACCATCGTCGGTGCCGGTGCCACCGGTGATTCCG CGATGGACGCCGGCAACATGATCAAGCCGCTGCTCGCCCGTGGTGAGCTGCGCCTGGTCGGTGCGACCACCCTCGACGAG TACCGGAAGTACATCGAGAAGGACGCCGCCCTGGAGCGTCGTTTCCAGCAGGTCTACGTCGGTGAGCCGACGGTGGAGGA CACCATCGGTATCCTCCGTGGTCTCAAGGAGCGCTACGAGGTCCACCACGGCGTCCGGATCCAGGACTCCGCCCTGGTCG CCGCCGCGACCCTGTCCGACCGCTACATCACCAGCCGTTTCCTGCCGGACAAGGCCATCGACCTCGTCGATGAGGCCGGG TCCCGGCTGCGCATGGAGATCGACTCCCGCCCGGAAGAGATCGACGACGCCGAGCGCATCGTCCGTCGCCTCGAGATCGA GGAGATGGCGCTGAGCCAGGAGACCGATGACGCGTCCAAGGACCGTCTCGAGAAGCTGCGCGCAGAGCTGGAGGACGAGC GTGAGAAGCTCTCCGGACTCACCGCGCGCTGGGAGAACGAGAAGGGCTCCATCGACGCGGTCCGCTCCCTCAAGGAGGAA CTGGATTCGCTGAAGACCGAGTCTGAGATCGCCGAGCGAGACGGGGACTACGCCCGTGTCGCCGAGCTGCGCTACGGCCG GATCCCGGAACTGGAGAAGGAGCTCGCCGGAGCCGAGGCGTCCGCCGCCAAGGCCGAGGAGGAGCGCATGCTCACCGAGG AGGTCACCCCGGACACCATCGCCGAGGTCGTCGCCGCCTGGACGGGCATCCCCGCCGGCAAGATGCTGCAGGGCGAGACC GAGAAACTGCTCGCCATGGAGCAGGTGCTGGGTGGCCGCGTCGTCGGTCAGAAGGACGCCGTCACCGCGGTCTCCGACGC GGTGCGTCGTTCCCGGGCCGGTGTCGCCGACCCGGACCGGCCGACCGGTTCCTTCCTCTTCCTGGGGCCGACCGGTGTCG GTAAGACCGAGCTGGCGAAGTCGCTGGCGGAGTTCCTCTTCGACGACGACCACGCCATGGTCCGCATTGACATGTCCGAG TACGGCGAGAAGCACTCTGTGGCGCGTCTCGTCGGTGCTCCCCCCGGATACGTCGGCTACGACGCCGGTGGACAGCTCAC CGAGGCCGTGCGGCGCCGCCCGTACACCGTGGTGCTGTTCGACGAGGTCGAGAAGGCGCACCCGGATGTCTTCGACGTAC TGCTGCAGGTCCTCGACGAAGGACGCCTGACCGACGGCCAGGGCCGGACCGTGGACTTCCGCAACACGATCCTGATCCTC ACCTCGAACCTCGGTGCCGGTGGCACGGATGAGCAGGTGATGGACGCGGTGAAGCACGCCTTCAAGCCGGAGTTCATCAA CCGTCTCGACGACGTGGTCATCTTCGAGTCCCTGTCCGCCGAACAGCTGAAGTCCATCGTGGAGATCCAGGTCCGTCAGC TCGCCGAGCGGCTGGCCGCCCGTCGCCTGGACCTGCAGGTCACCGAGGCTGCGAAGAGCTGGTTGGCTGAGCGTGGTTAC GAGCCGGCCTACGGTGCCCGCCCGCTGCGTCGCCTGATCCAGAAGGCGATCGGGGACGCACTGGCGAAGAAGCTGCTCGC CGGTGAGGTCCGCGACGGCGACACGGTGCAGGTCGATGTGGACCCGCACCTCGATTCCCTGGTCATCGAGGCTGTCGCCC ACGAGGACTGA Protein sequence : MSSFTPTTRTQEAMQAALQSASAKGNPDIRPAHLLVAILEQEDSIARPVLQAAGVDADGVLADARDLVAGYATAAGDGLA NPNFNRDALNALTAAQELAAELGDTYVSTEVLLAGIAKGSGDAAEALQNRGGTFEAVRGAFESVRGNRKVTTEEPEGQFQ ALEKYSTDLTARAREGKIDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLRGKKLIS LDLGSMVAGAKYRGEFEERLKAVLDEIKEAEGEVITFIDELHTIVGAGATGDSAMDAGNMIKPLLARGELRLVGATTLDE YRKYIEKDAALERRFQQVYVGEPTVEDTIGILRGLKERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAG SRLRMEIDSRPEEIDDAERIVRRLEIEEMALSQETDDASKDRLEKLRAELEDEREKLSGLTARWENEKGSIDAVRSLKEE LDSLKTESEIAERDGDYARVAELRYGRIPELEKELAGAEASAAKAEEERMLTEEVTPDTIAEVVAAWTGIPAGKMLQGET EKLLAMEQVLGGRVVGQKDAVTAVSDAVRRSRAGVADPDRPTGSFLFLGPTGVGKTELAKSLAEFLFDDDHAMVRIDMSE YGEKHSVARLVGAPPGYVGYDAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILIL TSNLGAGGTDEQVMDAVKHAFKPEFINRLDDVVIFESLSAEQLKSIVEIQVRQLAERLAARRLDLQVTEAAKSWLAERGY EPAYGARPLRRLIQKAIGDALAKKLLAGEVRDGDTVQVDVDPHLDSLVIEAVAHED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-100 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB1 | YP_004758802.1 | ATP-dependent Clp protease ATP-binding subunit | VFG2084 | Protein | 8e-112 | 44 |
