Gene Information

Name : alaT (CVAR_0328)
Accession : YP_004758749.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Unknown
Product : alanine aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : 2.6.1.1
Position : 397024 - 398283 bp
Length : 1260 bp
Strand : -
Note : Aspartate/tyrosine/aromatic aminotransferase

DNA sequence :
ATGATGGGAGGAATGAGCACCACACCGAAGCACCCCGTGGAGCTTCGTCCCCTGGACCAGTCGACGAAGCTCCAGAATGT
CCTCTACGAGATCCGCGGCCCGGTGAACGCCGAGGCCGAGCGTATGGAGGCCGACGGCCACCGGATCCTCAAGCTCAACA
CCGGCAACCCTGCCGCCTTCGGCTTCGATGCCCCGGACACCATCGTCCAGGACATGATCACCGGCCTGCCCTACGCCGCC
GGGTACTCCCAGTCCAAAGGCATTCCCTCTGCCCGCCGCGCCGTGGTCACCCGCTACGAGCTCATCCCCGACTTCCCCGC
GTTCACCACGAATGACGTCTACCTCGGCAACGGTGTCTCCGAGCTCATCTCGATGACCACCCAGGCCCTGCTCAACGACG
GTGACGAGGTCCTCATCCCCTCACCGGACTACCCGTTGTGGACGGCGGCGACCACTCTTGCCGGCGGTAAGGCCGTCCAC
TACCTCTGCGACGAGGAGAACGACTGGGCCCCGTCCATCGAGGACATCGAGTCCAAGGTCACCCCGCGGACCAAGGCGAT
CGTCGTGATCAACCCGAACAACCCGACGGGCGCGGTGTACAGCCGCGAGGTGCTCGAGCGGATCGTCGCCGTCGCCCGGG
AGCATTCACTGCTGGTGCTCTCCGACGAGATCTACGACAAGATCCTCTACGATGACGCCGTCCACATCAACACGGCGTCC
CTCTGCCCTGACCTGCTGTGCATCACCTTCAACGGCCTGTCGAAGGCCTACCGTGCCGCCGGTTTCCGTTCCGGCTGGAT
GGTCCTGACCGGGCGGAAGGAACATGCACGGGGATTCATCGAGGGCATCGAACTGCTGTGCTCGACCCGCCTGTGCGCCA
ATGTGCCCGCCCAGTACGGAATCCAGGTGGCACTGGGTGGACGCCAGTCCATCGACGATCTGGTGCTCCCCGGTGGTCGG
CTGCTCGAGCAGCGCAACGTGGCCTATGAGAAGCTCAACGAAATTCCCGGCGTGAGCTGCGTTAAGCCGATGGGTGCGCT
CTACGCGTTCCCGAAGCTGGACCCGAACGTCCACGAGATCCACGACGACGAGCAGTTCATGTTCGACCTGCTCCGTGCCG
AGAAGATCCACCTGGTCCAGGGCACCGGCATGAACTGGCCGACCCCGGACCACTTCCGCGTCGTCACCCTGCCGTGGGCC
CGGGACCTGGCTGAGGCGATCGAGCGGCTCGGCAACTTCCTCGCCAGCTACAAGCAGTAG

Protein sequence :
MMGGMSTTPKHPVELRPLDQSTKLQNVLYEIRGPVNAEAERMEADGHRILKLNTGNPAAFGFDAPDTIVQDMITGLPYAA
GYSQSKGIPSARRAVVTRYELIPDFPAFTTNDVYLGNGVSELISMTTQALLNDGDEVLIPSPDYPLWTAATTLAGGKAVH
YLCDEENDWAPSIEDIESKVTPRTKAIVVINPNNPTGAVYSREVLERIVAVAREHSLLVLSDEIYDKILYDDAVHINTAS
LCPDLLCITFNGLSKAYRAAGFRSGWMVLTGRKEHARGFIEGIELLCSTRLCANVPAQYGIQVALGGRQSIDDLVLPGGR
LLEQRNVAYEKLNEIPGVSCVKPMGALYAFPKLDPNVHEIHDDEQFMFDLLRAEKIHLVQGTGMNWPTPDHFRVVTLPWA
RDLAEAIERLGNFLASYKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-150 76
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-150 76
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-150 76
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 2e-150 76