Gene Information

Name : CVAR_2966 (CVAR_2966)
Accession : YP_004761381.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Unknown
Product : transposase for insertion sequence element
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3351509 - 3352174 bp
Length : 666 bp
Strand : -
Note : Transposase and inactivated derivatives

DNA sequence :
GTGAAGATCGCCCCGTCCACCTTCTACGCACACACCACCAGACCACCATCAGCGCGCACCCTGCGTGACGAGAAACTCAC
CGAGGAGATCATCACCGTGCACCAAGCGAACTACGACGCCTACGGCGCCAGGAAGATGCACGTCGTGATCAACCGCGACG
ACCCGCACCAACGGGGCCATGTGGCCCGCTGCACCATCGAACGACTCATGCGCGCGGCCGGCCTGCGCGGCATCGTGAGG
GCCAAAGCACCGAACACGACCCGCTCCGCTCCGAGGGAAAAGTGCCCCGCGGACCTGGTCAACCGGCACTTCGCCAGCTA
CTGGCCCAACCGCCTGTGGGTCGCAGACATCACCTACGTCTGCACATTCTCCGGATGGGTGTACGTCGCCTTCGTTACCG
ACGTGTTCTCCCAGATGATCGTCGGCTGGCAGTGCTCGCGTTCCCTGTACACCGGACTGGCAGAAGACGCCCTGACCATG
GGCATCTACCAGCGACGGCGGGAAGGCTGGAACAACCTGTCCGGCCTGGTGCACCACTCCGACCGGGGTGTGCAGTACCG
GGCGTTCCGCTACGGCGAAGCCCTGGATGACTGGATGACGAGCAGACCGTCGCATCGGTCGGGTCGAAGGGAGACCCCTA
CGACAACGCCCTGGCAGAGGCGGTGA

Protein sequence :
MKIAPSTFYAHTTRPPSARTLRDEKLTEEIITVHQANYDAYGARKMHVVINRDDPHQRGHVARCTIERLMRAAGLRGIVR
AKAPNTTRSAPREKCPADLVNRHFASYWPNRLWVADITYVCTFSGWVYVAFVTDVFSQMIVGWQCSRSLYTGLAEDALTM
GIYQRRREGWNNLSGLVHHSDRGVQYRAFRYGEALDDWMTSRPSHRSGRRETPTTTPWQRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 8e-32 45
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 1e-25 44
CDC7B_2035 YP_005163476.1 transposase-like protein Not tested Not named Protein 7e-31 44
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 6e-26 43