Gene Information

Name : arsT (CVAR_2932)
Accession : YP_004761347.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Resistance
Product : putative arsenic-transport protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 3315494 - 3316717 bp
Length : 1224 bp
Strand : -
Note : Arsenite efflux pump ACR3 and related permeases

DNA sequence :
ATGTGTCCAGAGTACCCGAAACATATTGACGACTATCAATACATTTGCTATTCTCCGCTCTGCCGGGCATCCACGGACAA
CGACTTCCCGGACAGCTTCCTTACCGACCCGATGAAAGTAGGCCACCACGTGTCCCTCATCGACCGACTCCTCCCGGTGT
GGATCATCCTTGCCATGGCGGCAGGTCTGCTGCTCAGCCACACCGGACTGGCGGACGTCCTCGGTGCCACCGAGATCGCC
GGGGTCTCCCTGCCGGTCGCCGTCGGACTACTCGTCATGATGTACCCGCCGTTGGCGAAGGTCCGCTACGACACCGCCGG
AAGGATCACCGCCGACCGTCGGCTGATGGCTGTCTCCCTCACTCTCAACTGGATCCTCGGACCGGCACTGATGTTCGCTC
TGGCCTGGTTGTTCCTTCCCGACCAGCCGGAACTGCGCACCGGGCTGATCATCGTCGGCCTGGCCCGCTGCATTGCCATG
GTGCTCATCTGGTCCGAACTGGCCTGCGGCGACCGCGAAACCACCGCCGTGCTCGTCGCGGTGAACTCGGTGTTCCAGGT
GCTCATGTTCGGCGTCCTCGGTTGGTTCTATCTGAAGATCCTGCCGTCGTGGTTGGGTCTGTCGACGACCTCGGCGGAGT
TCTCCTTCCTTGCTATCGCCGGCTCGGTGCTCGTCTTCCTCGGTATCCCGTTGGTGGCCGGTGCCGCCTCCCGGCTGCTC
GGCGAACGGCTCCGCGGTCATCGCTGGTACGAGGAGGTTTTCCTGCCGCGGGTCTCCCCGCTGGCCCTGATCGGTCTGCT
GTACACCATTGTCATCCTGTTCACCCTGCAGGGACACCAGGTCACCGACGACCCGTGGTCGGTCGCCCGCGTCGCCCTGC
CACTGGTGGTGTACTTCGCTGTCATGCCCGCGCTGGCCCTGACGCTGTCCCGTGCCGTGGGCCTGGGGTACGCCCGGTCG
ACCTCGGTCGCCTTCACTGCGGCGGGCAACAACTTCGAGCTCGCCATTGCCGTGGCCGTCGGTACCTTCGGTGCGGACTC
CGGCCAGGCACTCGCCGGCACCGTTGGTCCGCTCATCGAGGTTCCCGTGCTGGTGGGCCTGGTCTACGTCATCCGACGCC
TAGGCCCGCTGCTCTTCCCCGGCGATTCGACCCTGCCGCCCGGCACAGCGTCCTCCTCTGATCCCGTCCCTTCTCCCACC
ATCACGGAGCACACGATCCCATGA

Protein sequence :
MCPEYPKHIDDYQYICYSPLCRASTDNDFPDSFLTDPMKVGHHVSLIDRLLPVWIILAMAAGLLLSHTGLADVLGATEIA
GVSLPVAVGLLVMMYPPLAKVRYDTAGRITADRRLMAVSLTLNWILGPALMFALAWLFLPDQPELRTGLIIVGLARCIAM
VLIWSELACGDRETTAVLVAVNSVFQVLMFGVLGWFYLKILPSWLGLSTTSAEFSFLAIAGSVLVFLGIPLVAGAASRLL
GERLRGHRWYEEVFLPRVSPLALIGLLYTIVILFTLQGHQVTDDPWSVARVALPLVVYFAVMPALALTLSRAVGLGYARS
TSVAFTAAGNNFELAIAVAVGTFGADSGQALAGTVGPLIEVPVLVGLVYVIRRLGPLLFPGDSTLPPGTASSSDPVPSPT
ITEHTIP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 2e-62 48
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 3e-74 45
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 2e-74 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsT YP_004761347.1 putative arsenic-transport protein BAC0573 Protein 3e-79 48
arsT YP_004761347.1 putative arsenic-transport protein BAC0004 Protein 1e-64 45