Gene Information

Name : tpx (CVAR_2861)
Accession : YP_004761274.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.-
Position : 3221468 - 3221962 bp
Length : 495 bp
Strand : -
Note : Peroxiredoxin

DNA sequence : 
ATGGCTGATACCGCAATCTCCGGAACCCCCGCCCACACCGTCGGCGATCTTCCCGCGGTCGGTGCTGCGGCGCCCGCTTT
CACCACCGTCAACGCCGACCTGCAGGATGTCTCGCTGAGCGACTTCGCCGGCAAGCGCGTGATCCTCAGCATCTTCCCGT
CGGTCGACACCGGCGTGTGCGCGAACTCCGAGCGTGAGTTCAACAAGCGCGCCACCGGCCTGGACAACACGGTCGTCGTC
TCGGTCTCCAAGGACCTCCCCTTCGCCCTGGGCCGCTTCTGCGCCGCCGAGGGCATCGAGAACGTCACCGCGACCTCGTC
GTTCCGCTCCTCCTTCAGCGAGGACTACGGTGTGCGTCTCCTCGATTCCCCGCTGGCCGGTGTGCTGGCCCGCGCGGTCG
TCGTCATCGACACCGACGGCACCGTGCTCCACACCGAGCTGGTCCCCGAGATCACCACCGAGCCCGACTACGACGCCGCC
CTCGCGGCGCTCTAG

Protein sequence : 
MADTAISGTPAHTVGDLPAVGAAAPAFTTVNADLQDVSLSDFAGKRVILSIFPSVDTGVCANSEREFNKRATGLDNTVVV
SVSKDLPFALGRFCAAEGIENVTATSSFRSSFSEDYGVRLLDSPLAGVLARAVVVIDTDGTVLHTELVPEITTEPDYDAA
LAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-31 46
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 7e-32 46
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-31 45
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-31 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_004761274.1 thiol peroxidase VFG0087 Protein 3e-32 46