Gene Information

Name : fiuP1 (CVAR_2807)
Accession : YP_004761219.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Virulence
Product : iron ABC transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 3146467 - 3147576 bp
Length : 1110 bp
Strand : -
Note : ABC-type enterobactin transport system, permease component

DNA sequence :
ATGACCCTCAGAGAACGTCTCGCCCGCAACACCAGTGAGTCCGCGGTCGACTTCGGCTACCGCAACGTCGTGGTCCGTAC
CCCGAAGACCAGCAACCGCATCCATGTCCGCCTCGCGGTCGTCGCGGCGTCCTTCATCCTCGCCGCCGCTGTCCTGGCGA
TCATCGCGATCGGTATGGGCGACTACCCGCTGAACCCGTGGCAGATCACGAAGGCGATCTTCGGCGCGCCCGAGACCCGC
TTCCACCGCATCGTGGTGGTGGAGTGGCGCATGCCGGTGGCGATCGCCGCGGTCGTCTTCGGCGCCCTGCTCGGCATCGG
CGGCGCGATCTTCCAGTCGATGACGCGCAACCCGCTGGGTTCGCCGGACATCATCGGTTTCGATGCCGGCTCCTTCACCG
CGGTGACGGTGTGCATGCTGGTCATCGGCACCACCGCGTACTGGAACATCGCCTTCGCCGCGATCATCGGCGGCATCATC
ACCGCCTTCATCGTCTTCATGCTGGCCCGCAAGAACAAGAGGGTGGAGAGTTTCCGCCTGATCATCGTGGGCATCGGTGT
CTCGGCGACCCTCGGGTCGCTGAACTCCTACCTCATCACCCGCGCGGACGTGGAGGACGCCATGATGGTCGGCTTCTGGT
CCGCCGGCTCGATCAACCGGGTGACCTGGAACTCCCTGGTCCCGGTGCTGATCCTCGCCGCGGTGGTGGTGGCCCTGGTC
GCCCTGCTCGCCCCGGCGCTCAAGCAGATGGAGCTCGGGGATGACGCCGCCACCACCCAGGGCGTCAAGGTCGAACGCAC
CCGACTGCTGCTGATGGTGGTCGGCGTGGCGACGACCGCCCTGGTCACCGCCGCCGCCGGACCGATCAGCTTCATCGCCC
TGGTCGCCCCGCAGCTCGCCCGACGCATCGCCGGGACGCCCGGTGTGACGGTCCTCGGCGCCGCCGCCGTCGGTGCGGCC
CTGCTGACCTTCGCCCACTTCCTGTCCCTGGTGATCTCCCACTTCTACCGGTCGATCCCGGTCGGCCTGCTCACCGTGAG
CGTGGGTGGCATCTACATGATCTGGCTGCTGATCCGCGAGGCGCGCAGGCAGTACGGGACGCCGAAATGA

Protein sequence :
MTLRERLARNTSESAVDFGYRNVVVRTPKTSNRIHVRLAVVAASFILAAAVLAIIAIGMGDYPLNPWQITKAIFGAPETR
FHRIVVVEWRMPVAIAAVVFGALLGIGGAIFQSMTRNPLGSPDIIGFDAGSFTAVTVCMLVIGTTAYWNIAFAAIIGGII
TAFIVFMLARKNKRVESFRLIIVGIGVSATLGSLNSYLITRADVEDAMMVGFWSAGSINRVTWNSLVPVLILAAVVVALV
ALLAPALKQMELGDDAATTQGVKVERTRLLLMVVGVATTALVTAAAGPISFIALVAPQLARRIAGTPGVTVLGAAAVGAA
LLTFAHFLSLVISHFYRSIPVGLLTVSVGGIYMIWLLIREARRQYGTPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-29 41
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 8e-30 41
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-29 41
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fiuP1 YP_004761219.1 iron ABC transport system permease VFG0928 Protein 4e-32 46