Gene Information

Name : fiuA1 (CVAR_2806)
Accession : YP_004761218.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Virulence
Product : iron ABC transport system ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3145601 - 3146470 bp
Length : 870 bp
Strand : -
Note : ABC-type sugar transport systems, ATPase components

DNA sequence : 
ATGAGCGATATGAGCGATGCTGAAATGAAAGAGACTATGACTGACGCACGACTTCAGGTCCGCAACGCCACCATCGGCTA
CGACCAGCGGATCATCTCCACCGACCTGACCGTGGACATTCCCCACGAGTCCTTCACCGCCATCATCGGACCCAACGGGT
GCGGCAAGTCCACCCTGCTGCGCGCGGTGGCCCGCGTCCTCACCCCGGTGAAGGGCGAGGTGCTGCTCGACGGGAAGCCG
ATCGCGTCCCACGGTGCGAAGCAGGTCGCCCGGCAGCTGGGCCTGCTGCCGCAGACCTCCCTGGCCCCGGAGGGCATCCG
GGTCGCCGACCTCGTCGCGCGTGGCCGTGCCCCGTACCAGTCCCTGTTCCACCAGTGGAGCCCGGAGGACGAGAAAGCCG
TGCAGGACGCTCTCGTCGCGACCCGGACGGACAACCTGTCGTCCCGGCTGGTCGCGGAACTGTCCGGTGGTCAGCGTCAG
CGCGTGTGGGTGGCGATGCTGCTCGCCCAGCAGACGCCGATCATGCTGCTCGACGAGCCGACGACCTTCCTCGACATCGC
GCACCAGTACGAGCTCATGGAGCTGCTGAGGACCTTCCATGACGAGGGCAAGACCGTCGTCACGGTGCTGCACGACCTGA
ATCAGGCGTGCCGCTACGCGCAGCACCTCATCGTCATGCGCGACGGTCAGATCGTGACGACCGGGTCCCCGGCCGAGGTG
ATGACCCCGGATCTGGTGGAGGAAGTCTTCGGTCTGAAGGCGATGGTGGTGCCGGACCCGGTGACCGGGACGCCGAACAT
CGTGCCGCTGGACCCGCGGTCCGCGGAGGGTGGTCTCGCTCCGGTGACACCGGTCGTCGACGAGCTCTGA

Protein sequence : 
MSDMSDAEMKETMTDARLQVRNATIGYDQRIISTDLTVDIPHESFTAIIGPNGCGKSTLLRAVARVLTPVKGEVLLDGKP
IASHGAKQVARQLGLLPQTSLAPEGIRVADLVARGRAPYQSLFHQWSPEDEKAVQDALVATRTDNLSSRLVAELSGGQRQ
RVWVAMLLAQQTPIMLLDEPTTFLDIAHQYELMELLRTFHDEGKTVVTVLHDLNQACRYAQHLIVMRDGQIVTTGSPAEV
MTPDLVEEVFGLKAMVVPDPVTGTPNIVPLDPRSAEGGLAPVTPVVDEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-69 53
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-69 53
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-69 53
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-69 53
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-57 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-61 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-61 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-61 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-51 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-53 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-53 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-53 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-53 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fiuA1 YP_004761218.1 iron ABC transport system ATP-binding protein BAC0164 Protein 1e-57 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fiuA1 YP_004761218.1 iron ABC transport system ATP-binding protein VFG0925 Protein 4e-72 54
fiuA1 YP_004761218.1 iron ABC transport system ATP-binding protein VFG1042 Protein 1e-57 50