Gene Information

Name : CVAR_2548 (CVAR_2548)
Accession : YP_004760966.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2130
EC number : -
Position : 2873268 - 2874386 bp
Length : 1119 bp
Strand : -
Note : Putative NADP-dependent oxidoreductases

DNA sequence :
ATGCCGACGCCCCATTGCACCCGACCCGCGTCACCGTCCGTGGTTACCCTCGGGGAGGACAGTCATCCCCTCGTCAAGGA
GCACCAGAGTCGTATGAGCACCCGCACCGCACGTCAGATCGTCCTCGCGTCCCGCCCGGAGGCCACGCCCGGCCCCGAGC
ACTTCCGCACCGAGACCGTCGACCTCCCGGACCTCACCGACGGCGACATCGAGGTCAAGGTCCATTACCTCTCCCTCGAC
CCGTACATGCGCGGCCGGATGAGCGACGCGAAGTCCTACGCCGATCCGGTCCCCGTTGGTGGTGTCATGGAGGGCGAGAC
GGTCAGTGAGGTCGTCGCCTCGAAGAACCCGGACTTCGCCGAAGGTGACCTTGTGCTCTGGCGTACCGGCTGGGTGGACG
CCGCCGTCATCCCCGCCGCCAAGGTCCACACCGTCCGGAAGCTGCGGACCTTCGGCGCACCGGAGACCACAGCACTCGGC
GTCCTCGGTATGCCCGGATTCACGGCATGGGCGGGCATGAAGTTCATCGGTAAGCCGCAGGCAGGGGAGACCGTGGCGGT
CGCTGCGGCGTCCGGCCCGGTCGGTTCGATGGTCGGCCAGCTCGCGCAGCTCGCCGGGGCCCGTGCCGTCGGCATCGCCG
GTGGTGAGAAGAAGTGCGCCTGGGTCAGTGACGGGATCGGCTTCGACGCCGCCGTCGACCACCGTGACCCGGACTTCTAC
AACAACCTCAAGGCCGCCTGCCCGGACGGCGTGGACGTCTACTACGAGAACGTCAGCGGTCCGGTGTGGGACGCGGTGCG
CCCGCGGCTCAACCTGTACTCGCGGGTACCGGTGTGCGGCCTCGTCGCCAACTACAACACCGGTGGCCTGGGCGATCATG
ACCGCCTGCCTGCGACGATGAACACGATCCTCACCCAGAGTGTGCTGGTCCGCGGGTTCATCCAGACCGAGTTCGCCGAG
CACTACGACGAGTTCCTCGACGAGATCGGCTCGAAGGTCGCCGACGGCACCATCGTCCACAAGGAGGACATCGTCGAGGG
ACTGGAGAACGCCCCGGAGGCCTTCATCGGTCTGCTCGAGGGGAAGAACTTCGGCAAGCTGCTGGTCAAGGTAAATTAA

Protein sequence :
MPTPHCTRPASPSVVTLGEDSHPLVKEHQSRMSTRTARQIVLASRPEATPGPEHFRTETVDLPDLTDGDIEVKVHYLSLD
PYMRGRMSDAKSYADPVPVGGVMEGETVSEVVASKNPDFAEGDLVLWRTGWVDAAVIPAAKVHTVRKLRTFGAPETTALG
VLGMPGFTAWAGMKFIGKPQAGETVAVAAASGPVGSMVGQLAQLAGARAVGIAGGEKKCAWVSDGIGFDAAVDHRDPDFY
NNLKAACPDGVDVYYENVSGPVWDAVRPRLNLYSRVPVCGLVANYNTGGLGDHDRLPATMNTILTQSVLVRGFIQTEFAE
HYDEFLDEIGSKVADGTIVHKEDIVEGLENAPEAFIGLLEGKNFGKLLVKVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0097 YP_252012.1 hypothetical protein Not tested SCCmec Protein 2e-54 43