Gene Information

Name : znuB (CVAR_2436)
Accession : YP_004760854.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Virulence
Product : zinc ABC transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2743657 - 2744622 bp
Length : 966 bp
Strand : +
Note : ABC-type Fe3+-siderophore transport system, permease component

DNA sequence : 
ATGGTGATCAGCGTCGGTGTCGGCGCGGTATCGATCGCCCCCGGAGAGGTGATCGAGGTCATCTCCGGGCGCGTGGCGGG
AAAACCCGAGCTTGGCTCCCTGGATTTCATCGTCTGGGAACTACGCATGCCGCGCGTGTTGCAGGCCGCAGTGGTCGGCG
CCGCCCTGGCAGTCGCCGGAGCGTGCGCACAGGTCCTCGTCCGCAACCCCATCGCCGACCCCTACGTCCTCGGCCTGTCT
TCCGGAGCCGGGGTCGCGGCGGTCCTGGTCATCACTTCCGTCGGTGTTGCCACCTTCGGAGTGCTGTTGCTCCCGGTCGC
CTCTTTCGTCGGTGCCGCTGCGACCGGAATCATCGTCGCGGCCACAGCGACCTCACGCTGGGGGATGTCCGCAGGCCGAC
TGGTGCTGTCCGGAGTCGCGATCGGTCAACTTCTCGGAGGGGTGATGTCCTTTCTCCTCATCCGATCCGGGAATTCCGAT
GCCACTCAGCAGGTGATGTTCTGGCTTCTCGGGAGTCTGGCAGGCGCCCAATGGCGACTGCTGCTCGTCATCGGCCCCGT
GATCATCGTCGCGATCGTTCTCGTCGCAATGTCTAGCGGGCGCCTTGACCTCCTCGGCCTCGGAGACGCTCAAGCGGCCG
CGTCAGGGGTGCATCCGGGGCGTTCCCGGGTGCTCGTCTTCGCTCTCGCTTCCCTGATGACCGGCGCCGCAGTCGCCGTC
TCGGGGACTATCGGCTTCGTGGGCCTCATCGTGCCGCACATCGCCCGTCTCCTCGTGGGCGGTATGCACAAGCGCGTCAT
TCCCGTGTCTGCGTTGCTGGGGGCGATCCTGCTCAGCTCGGCGGACCTCGCCGCGCGCACCGTGCTAGCACCGTCAGAGC
TTCCAGTCGGGATCTTCACCGCGGCGATCGGCGTGCCAATCTTCATCCTCCTCATGCGCAAGAATCGCGCCATGGCCCTC
TCATGA

Protein sequence : 
MVISVGVGAVSIAPGEVIEVISGRVAGKPELGSLDFIVWELRMPRVLQAAVVGAALAVAGACAQVLVRNPIADPYVLGLS
SGAGVAAVLVITSVGVATFGVLLLPVASFVGAAATGIIVAATATSRWGMSAGRLVLSGVAIGQLLGGVMSFLLIRSGNSD
ATQQVMFWLLGSLAGAQWRLLLVIGPVIIVAIVLVAMSSGRLDLLGLGDAQAAASGVHPGRSRVLVFALASLMTGAAVAV
SGTIGFVGLIVPHIARLLVGGMHKRVIPVSALLGAILLSSADLAARTVLAPSELPVGIFTAAIGVPIFILLMRKNRAMAL
S

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 6e-22 48
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 6e-22 48
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 6e-22 48
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 2e-21 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
znuB YP_004760854.1 zinc ABC transport system permease VFG0922 Protein 4e-18 41