Gene Information

Name : fiuA2 (CVAR_0239)
Accession : YP_004758659.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Virulence
Product : iron ABC transport system ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 284215 - 285048 bp
Length : 834 bp
Strand : +
Note : ABC-type sugar transport systems, ATPase components

DNA sequence : 
ATGACTGACGCACGACTTCAGGTCCGCAACGCCACCATCGGCTACGACCAGCGGATCATCTCCACCGACCTGACCGTGGA
CATCCCCCACGGGTCCTTCACCGCCATCATCGGTCCGAACGGCTGCGGCAAGTCGACGCTGCTGCGCGCGGTCGCCCGCG
TCCTCACCCCGGTGAAGGGGGAGGTGCTGCTCGACGGTCAGCCGATCGCGTCCCACGGTGCGAAGGAAGTGGCCCGCCAG
CTGGGCCTGCTGCCGCAGACCTCGCTGGCGCCGGAGGGGATCCGGGTTGCGGATCTCGTGGCCCGTGGGCGTGCCCCGTA
CCAGTCCCTGTTCCACCAGTGGAGCCCGGAGGACGAGAAAGCCGTGCAGGACGCTCTCGTCGCGACCCGGACCGACAACC
TCTCGGCCCGGCTGGTCTCGGAACTGTCCGGTGGCCAGCGTCAGCGGGTGTGGGTGGCGATGCTGCTGGCACAGCAGACG
CCGATCATGCTTCTCGATGAGCCGACGACCTTCCTCGACATCGCCCACCAGTATGAGCTGATGGAGTTGCTGCGCACCTT
CCACGACGGTGGGAAGACCGTGGTCACGGTGCTGCACGACCTGAATCAGGCATGCCGCTACGCCAAGCACCTCATCGTCA
TGCGCGACGGGCAGATCGTGACCACCGGTGCGCCGGCGGACGTCATGACGCCCGATCTTGTGGAGGAGGTGTTCGGGCTG
CGCGCCCTGGTGGTGCCGGATCCGGTGACAGGGACGCCCAGCATCGTGCCGCTGGATCCGCGCTCGGCGGAGGGTGGTCT
GGCTCCGGTGACGCCGGTCGTCGACGAGGTCTGA

Protein sequence : 
MTDARLQVRNATIGYDQRIISTDLTVDIPHGSFTAIIGPNGCGKSTLLRAVARVLTPVKGEVLLDGQPIASHGAKEVARQ
LGLLPQTSLAPEGIRVADLVARGRAPYQSLFHQWSPEDEKAVQDALVATRTDNLSARLVSELSGGQRQRVWVAMLLAQQT
PIMLLDEPTTFLDIAHQYELMELLRTFHDGGKTVVTVLHDLNQACRYAKHLIVMRDGQIVTTGAPADVMTPDLVEEVFGL
RALVVPDPVTGTPSIVPLDPRSAEGGLAPVTPVVDEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-69 53
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-69 53
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-69 53
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-69 53
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-60 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-56 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-59 43
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-59 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-54 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-54 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-54 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-54 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-50 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fiuA2 YP_004758659.1 iron ABC transport system ATP-binding protein BAC0164 Protein 6e-57 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fiuA2 YP_004758659.1 iron ABC transport system ATP-binding protein VFG0925 Protein 2e-72 55
fiuA2 YP_004758659.1 iron ABC transport system ATP-binding protein VFG1042 Protein 6e-57 50