Gene Information

Name : fiuP2 (CVAR_0237)
Accession : YP_004758657.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Virulence
Product : iron ABC transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 281979 - 283073 bp
Length : 1095 bp
Strand : +
Note : ABC-type Fe3+-siderophore transport system, permease component

DNA sequence :
ATGACACAACAGACGACCAGTGCCTCCGGCGGCGTCCCAGGGGACAACCCTGACGGCGTCTCCGGCGGTGCCGACCATGC
GCCGAAGCAGACCTCCCTCTACGCCCGACGCACCATCGGACTCATCGGCCTGGCCACAGCCCTGGTCATCGCCTTCCTCC
TGAGCCTGGCCAACGGCGCGAACCCGATCCCCTACTCCGATGTGTGGGATGCGATCTGGCACCGCGGCGAGAACGAGGCG
TCCTGGATTGTCTGGGACCAGCGACTGCCCCGCACCGTCATCGGCATCCTCACCGGTGCGGCGTTCGCCCTGGCCGGCGC
ACTGATCCAGGCGCTGACCCGCAACCCGCTGGCGGACTCCGGCATCCTCGGCGTCAACGCCGGTGCCGGGCTGGCGGTGA
CGGTCGGCGTCGGCATCTTCGGCATCGCCGGGATCACCCAGTACATCTGGTTCGCCTTCATCGGTGCAGCCGCAACGACC
ATTCTCGTCTACATCATCGGTGTGGCCGGTGGTGCCCGCGGCGCGAACCCGGCCACCCTGGTGCTCGCCGGTGTGGCCCT
CGGCGCGGTGTTCGGCGGCATCACCAGCTTCCTCACCCTCATCGACCCGGACACGTTCGAGTCGATCCGGAACTGGAACC
TCGGTTCGGTCGCCCGCACTTCCCTGGATGACGCCCGCTTCGTCATCCCCTTCCTGCTCCTCGGGTTCGTCCTGGCGGTA
CTGGTGTCCACCGACCTGAACTCCATCGCCCTCGGTGATGACCTCGCCGCGTCCCTCGGAACGAAGGTGGTACGCACCCG
TGTCGTCACGATCCTCGCGGTGACCGTGCTCGCCGGTGGCGCGACCGCCCTGACCGGTGGCATCGGCTTCGTCGGTCTGA
TGGTCCCGCACGTGGTCCGCTGGATCGTGGGGCCCGACCAACGCTGGATCTTCTTCTACTGTCTGCTCGGCGGCCCGGTC
ATGGTGCTGCTGGCGGACACGCTGGGCCGCGTCATCGCGCGTCCCGGTGAGATCGAGGTCGGCATCCTCACCGCCGTCAT
CGGTGCGCCGGTGCTCATCGCCCTGGTCCGGCGGAAGAATGCGAGTGGCCTGTGA

Protein sequence :
MTQQTTSASGGVPGDNPDGVSGGADHAPKQTSLYARRTIGLIGLATALVIAFLLSLANGANPIPYSDVWDAIWHRGENEA
SWIVWDQRLPRTVIGILTGAAFALAGALIQALTRNPLADSGILGVNAGAGLAVTVGVGIFGIAGITQYIWFAFIGAAATT
ILVYIIGVAGGARGANPATLVLAGVALGAVFGGITSFLTLIDPDTFESIRNWNLGSVARTSLDDARFVIPFLLLGFVLAV
LVSTDLNSIALGDDLAASLGTKVVRTRVVTILAVTVLAGGATALTGGIGFVGLMVPHVVRWIVGPDQRWIFFYCLLGGPV
MVLLADTLGRVIARPGEIEVGILTAVIGAPVLIALVRRKNASGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 1e-17 42
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 1e-17 42
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 1e-17 42
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 1e-17 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fiuP2 YP_004758657.1 iron ABC transport system permease VFG0926 Protein 5e-26 47