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Name : CVAR_2233 (CVAR_2233) Accession : YP_004760656.1 Strain : Corynebacterium variabile DSM 44702 Genome accession: NC_015859 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 2530422 - 2532221 bp Length : 1800 bp Strand : - Note : ABC-type multidrug transport system, ATPase and permease components DNA sequence : ATGTCTGCGCAGTCGCAGAGTCCGCATAGCCCGCATAGCCCGCAGGAGCCACCCGCACAGTCTCCACCGGTTGTCCCTGA TGCACCGGACAACAGGGCCGAACAGAAAGCCGGCGCGGCCGAGCTGAAGAATCTTCTCCGTCCGGTCTCAGGGCGTCTCA TGCTCGGACGGATTCTTTCCGCTCTCTCCGCCGTCCTGGCTGTCGTCCCGTACATCGCCCTGGTCAAGATCGGTGCACTG CTCATCGACGGGGCGTCCCCCGGCGACGGTTCCGGCGCCGGCACCGGCATCGACGGCGACGAGGTCAACCGTTGGCTCAC GATTCTGCTCGGCGCCTTCATGGCTCGGCTCGTCATCTACTTCATCGCCCTGTCGGTCACCCACTTCGCCGATGTGGCCC TGGGGCACGGTATCCGGCTGCGGATGGTGACACGCTTCGCGAAGGTCCCGCTGAGCTGGTTCACCGCGACGAACTCCGGC CGCGTCCGCAAGGGCCTGCAGGACGACATCACCACCGTCCACTACCTCATTGCCCACCAGCCGGTCGAAGGCACCGGCGC GGTGGTCATGCCGCTGGCGCTGATGGTCTACGCCTTCATCGTGGACTGGCGGCTCGGACTGCTCTCCGTCGCCGTCGTCC CCGTGTACCTGCTGGCCATGATGATGACCATGAGGAACATGGGGGAGAAGACGGTGGAGATGGACCGGCGGCTCGGCGAT GTCTCGGCCCGCATGGTCGAGTTCGTCACCGGCATCTCCGTGGTCAAGGCCTTCGGCCGGGTCGGACGCGCGCACCGCAG CTACCAGCGTTCCGCCGATGAGTTCTACGACTTCTATCTCGCCTGGGTGAAGCCGCTGATGGCCGTCTCCTCCCTCGGTC AGTCCATCCTGGCGGTGCCGCTGATCCTGCTGGTCAACCTCGGCGGCGGCATGCTGCTGGTCCACAACGGTTACGTCGGT GTGGCAGATGTCCTGGCCACGTCGCTGATCGCACTGCTGGTGCCGTACTCCCTGGAGACCATGCAGAACAACACCTGGTC CAGCCAGATCGCCGGGGCCGCCGCGCTGCGCCTCACAGGTCTGCTCGAGACCCCCGTGCTGCAGGACGCCGCCAGTGCGA AGACCGCCCCCGTCTCCCACGAGGTCACCTTCGACCACGTCACCTACCGTTACCCCGGGGCAGACACCCCGGCGGTCGAC GACGTGAGCTTCACCCTGCCCGCCGGCACTGTCACCGCTCTCGTCGGCCCGTCAGGGTCCGGTAAGTCCACCATCGCCAC CCTGCTCGCCCGTTTCGATGATCCGCAGTCGGGCACGGTGGCTATCGGCGGCGTCCCTGTGAGGGACATCGCCGATCTGT ACTCCCATGTCGGGTTCGTGCTGCAGGATCCGCAGCTGGTCGCCGTGAGCATCCGCGACAACATTGCGCTGGGTCGGCCG GACGCCACCGATGCCGAGGTCCGTGATGCCGCCCGGGCCGCCCATGTCCTCGACGAGATCGAGGCCCTGCCCGACGGCTT CGACACCGTCTACGGCTCGGACACCGGGCTGTCCGGCGGACAGGCCCAGCGCATCGCCATCGCCCGCGCGCTGCTGGTGG ACGCCCCGGTGCTCGTCCTCGATGAAGCGACCGCGCTGACCGACCCCGAGTCGCAGCACGAGATCCAGCAGGCCCTCTCC ACCCTCGCGGAAGGACGCACCGTGCTGGTCATCGCCCACCGCCCCGAGGCGATCGCCGGGGTGGACCGGGTCATCCACGT CAACAACGGACAGGTCACCGCCGAGGAGGCACGGGCATGA Protein sequence : MSAQSQSPHSPHSPQEPPAQSPPVVPDAPDNRAEQKAGAAELKNLLRPVSGRLMLGRILSALSAVLAVVPYIALVKIGAL LIDGASPGDGSGAGTGIDGDEVNRWLTILLGAFMARLVIYFIALSVTHFADVALGHGIRLRMVTRFAKVPLSWFTATNSG RVRKGLQDDITTVHYLIAHQPVEGTGAVVMPLALMVYAFIVDWRLGLLSVAVVPVYLLAMMMTMRNMGEKTVEMDRRLGD VSARMVEFVTGISVVKAFGRVGRAHRSYQRSADEFYDFYLAWVKPLMAVSSLGQSILAVPLILLVNLGGGMLLVHNGYVG VADVLATSLIALLVPYSLETMQNNTWSSQIAGAAALRLTGLLETPVLQDAASAKTAPVSHEVTFDHVTYRYPGADTPAVD DVSFTLPAGTVTALVGPSGSGKSTIATLLARFDDPQSGTVAIGGVPVRDIADLYSHVGFVLQDPQLVAVSIRDNIALGRP DATDAEVRDAARAAHVLDEIEALPDGFDTVYGSDTGLSGGQAQRIAIARALLVDAPVLVLDEATALTDPESQHEIQQALS TLAEGRTVLVIAHRPEAIAGVDRVIHVNNGQVTAEEARA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDPW8_2175 | YP_005143723.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 3e-113 | 52 |
| irp2K | YP_005134503.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 3e-59 | 42 |
| irp2K | YP_005163491.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 3e-59 | 42 |
