Gene Information

Name : CVAR_0189 (CVAR_0189)
Accession : YP_004758609.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1937
EC number : -
Position : 229960 - 230229 bp
Length : 270 bp
Strand : -
Note : Uncharacterized protein conserved in bacteria

DNA sequence :
ATGAGGCTCAACGACGACACCACCACCGCCGCACTCGCCCGACTGAAGAGGGCCCGTGGTCAGCTCAACGGCGTCATCGA
CATGCTCGAGGCCGGCCGCGACTGCCAGGACGTGGTCACCCAACTGGCCGCCGTGTCCCGCGCACTGGACCGTGCCGGGG
TGAAGATCATCTCCGGCGGCATGCGCGAGTGCATCCGCTCCGCCGAACGCGGGGAGAGTCCGGAACTGTCCGAGGAACAA
CTGGAGAAGATGTTCCTGTCACTGTCGTGA

Protein sequence :
MRLNDDTTTAALARLKRARGQLNGVIDMLEAGRDCQDVVTQLAAVSRALDRAGVKIISGGMRECIRSAERGESPELSEEQ
LEKMFLSLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0080 YP_001220819.1 hypothetical protein Not tested chp/tomA region Protein 4e-10 47
unnamed BAA82170.2 - Not tested Type-II SCCmec Protein 1e-07 45
unnamed BAA86632.1 hypothetical protein Not tested Type-I SCCmec Protein 5e-08 45
unnamed BAC57484.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 3e-07 42
unnamed BAA82210.2 - Not tested Type-II SCCmec Protein 3e-07 42
SAV0048 NP_370572.1 hypothetical protein Not tested Type-II SCCmec Protein 5e-07 42
SA0045 NP_373285.1 hypothetical protein Not tested Type-II SCCmec Protein 5e-07 42
SERP2514 YP_190056.1 hypothetical protein Not tested Type-II SCCmec Protein 5e-07 42
unnamed BAB47614.1 hypothetical protein Not tested Type-III SCCmec Protein 3e-07 42
SAR0047 YP_039520.1 hypothetical protein Not tested Type-II SCCmec Protein 5e-07 42