Gene Information

Name : pdxS (CVAR_1553)
Accession : YP_004759980.1
Strain : Corynebacterium variabile DSM 44702
Genome accession: NC_015859
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1779825 - 1780721 bp
Length : 897 bp
Strand : -
Note : Pyridoxine biosynthesis enzyme

DNA sequence :
ATGAGTGAGAACACCCCGACCACCGGCACCGGACGCGTCAAGCGCGGCCTGGCCGACATGCTCAAGGGCGGCGTCATCAT
GGACGTCGTCACCCCGGAACAGGCCAGGATCGCCGAGGACGCCGGCGCCACCGCCGTCATGGCCCTGGAGCGCGTCCCCG
CCGACATCCGCGCCGAAGGCGGGGTCTCCCGCATGTCCGACCCGGACATGATCGAGGGCATCATCGACGCCGTCTCCATC
CCGGTGATGGCCAAGGCCCGCATCGGCCACTTCGTCGAGGCCCAGATCCTGCAGAGCCTCGGCGTCGACTTCATCGACGA
GTCCGAGGTCCTCACCCCGGCCGACTACTCCAACCACATCGACAAGTTCGGTTTCACCGTGCCCTTCGTCTGTGGTGCCA
CCAACCTCGGTGAGGCCCTGCGCCGTATCAACGAGGGCGCCGCGATGATCCGCTCCAAGGGCGAGGCCGGAACCGGCGAC
GTCTCCAACGCCGTCACCCACATGCGCACCATCCGCGCCGAGATCAACCGGCTGCGCTCCATGGCCCCCGACGAGCTCTA
CGTCGCGGCCAAGGAACTGCAGGCCCCGTACGACCTCGTGTGCGAGGTCGCCGAGAACGGTAAGCTTCCTGTGGTGCTGT
TCACCGCAGGCGGGATCGCCACCCCGGCCGATGCCGCGATGATGATGCAGCTCGGAGCCGAGGGTGTTTTCGTCGGCTCC
GGAATCTTCAAGTCGGGTGACCCGGCCAAGCGCGCCAAGGCTATTGTCCAGGCCACCCTCAACTACGACGACCCGGCAGA
GGTCGCCAAGGTCTCCCGTGGCCTCGGCGAGGCGATGGTCGGGATCAACGTCGACGAGATCCCGCAGCCGCACCGGCTCG
CGGAGAGAGGCTGGTAA

Protein sequence :
MSENTPTTGTGRVKRGLADMLKGGVIMDVVTPEQARIAEDAGATAVMALERVPADIRAEGGVSRMSDPDMIEGIIDAVSI
PVMAKARIGHFVEAQILQSLGVDFIDESEVLTPADYSNHIDKFGFTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGD
VSNAVTHMRTIRAEINRLRSMAPDELYVAAKELQAPYDLVCEVAENGKLPVVLFTAGGIATPADAAMMMQLGAEGVFVGS
GIFKSGDPAKRAKAIVQATLNYDDPAEVAKVSRGLGEAMVGINVDEIPQPHRLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-117 85
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-117 85
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-117 85