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Name : tkt (CVAR_1474) Accession : YP_004759899.1 Strain : Corynebacterium variabile DSM 44702 Genome accession: NC_015859 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1683143 - 1685374 bp Length : 2232 bp Strand : + Note : - DNA sequence : ATGTCGCCGTCTTACGGCGGCGCTGCCAGACCGTCAGGTTACCTGAGTGGACGCGGCGACCGTAAACCGCCGTACCACAG CCCCACAGACACCGCCGGGCAACTACACTGTCGAGGTACCCCACTTCAACATCAGGAAGGCAGCACCAGCGTGACTCTCC CCCCGGAACTCGAATCCCGTACCGTCCGGAACTACCCGGAGGACTGGGCTGAGCTGGACACCCGGGCGGTCGACACCGCA CGCGTGCTCGCAGCGGACGCCGTCGAGAACTGCGGTTCGGGGCACCCCGGCACCGCAATGTCCCTCGCTCCCCTGGCATA CACCCTGTACCAGCGGGTGCTGCGCCACGATCCGACCGATCCGTCCTGGGTCGGCCGTGACCGCTTCGTCCTCTCTGCCG GACACAGCTCACTGACCCAGTACATCCAGCTCTACCTCGGTGGGTTCGGTCTGGAGCTCGACGACCTCAAGGCACTGCGT ACGTGGGGCTCCCTCACCCCGGGGCACCCCGAGGTCGGCCACACCGCCGGTGTCGAGATCACCACCGGCCCGCTGGGTCA GGGCCTGGCGTCCGCCGTCGGTATGGCGATGGCGGCCCGCCGCGAGCGCGGCCTGCTCGACCCGGAGACCCCGGCCGGCG AGTCCCCGTTCGACCACAACATCTACGTCATCGCCTCCGACGGTGACATCCAGGAGGGCGTCACCTCCGAGGCGTCTTCT CTGGCGGGCACCCAGCAGCTCGGCAACCTCGTCGTCTTCTGGGACGACAACTCGATCTCCATCGAGGACAACACCGACAT CGCCTTCACCGAGGACGTCGTCGCCCGTTACGCCGCCTACGGCTGGCAGACCCTCGAGGCCAATGCCGAGGACGTCGTCG GCATCCTCGCCGCCGTCGAGGAGGCCAAGGCGGACACCTCCCGCCCGACCTTCGTCCGGATCCGATCGGTCATCGGCTAC CCCGCCCCGACCAAGATGAACACCGGCGGCGTCCACGGTGCCGCCCTGGGTGGCGACGAGGTCGCCGGTGTCAAGGAGGC CCTCGGCTTCGACCCCGCAGAGAGCTTCGCCGTCGCCGACGAGGTCATCGCCCACACCCGTCGGCTCAGCGAGCGTGCCG CCGCGGACCGTGCCGAGTGGCAGAAGGGCTTCGACGCCTGGGCCGCCGCCGCGCCGGAGGCCAAGGTCCTCCTCGACCGC ATCAGCGCCCGCGAGCTGCCGGAGGGCTTCGACGCCGATCTGCCGACCTGGGAGCCCGGCCAGGCGGTCGCGACCCGTAA GGCCTCCGAGGCGGCGCTGCAGGCACTCGGCGCCACCCTGCCCGAGCTGTGGGGCGGTTCCGCCGACCTCGCCGGCTCGA CCAACACCATCATCAAGGGCTCGCCCTCCTTCGGTCCGGAGTCCATCTCGACCGACGCCTGGTCCGCCGAGCCTTACGGC CGCAACCTGCACTTCGGTATCCGTGAGCACGCCATGGGTGCGATCCTCAACGGCATCGCCCTGCACGGCGGCACCCGCCC CTACGGTGCAACCTTCCTCCAGTTCGCCGACTACATGCGTGGTGCGGTCCGCCTCGGCGCCCTGATGAGCACCGACGTCT ACTACGTGTGGACGCATGACTCCATCGGCCTCGGTGAGGACGGTCCGACGCACCAGCCGGTCGAGCACCTCGCCGCGCTG CGCGCTATCCCGAACCTCTCGGTCATCCGCCCGGCGGACGCCAACGAGGCCGTCCAGGCATGGTCCGCGGCGCTGAAGGC CCCGGCCGCGCCGAAGGCCCTGATCTTCACCCGCCAGAACATCCCGGTGCTCGAGGGCACCGCCGAGAAGGCAGCCGAGG GTGTCGCCCGCGGCGCCTATGTCCTCGTCGAGTCCTCCACCGATGTTCCGCAGGTCATCCTGCTGGCCACCGGTTCCGAG GTCGAGCTGGCCGTCGCCGCCGCCGAGACCCTCGAGGCCGACGGCGTGGGCACCCGCGTCGTCTCCTTGCCGTGCATGGA GTGGTTCGAGGCGCAGGACGCCGACTACCGCGAGTCCGTCCTCCCTGCCGCCGTCACCGCCCGCGTCTCGGTCGAGGCCG GTATCGCCATGCCGTGGAAGGCCTACACCGGTCTCACCGGCGCGAACATCTCCCTGGAGCACTTCGGTGCCTCCGCCGAC TACAAGACCCTCTACCGGGAGTACGGCATCACCGCCGACGCCGTGGTGGACGCCGCCCGCTCCCTGCTCTGA Protein sequence : MSPSYGGAARPSGYLSGRGDRKPPYHSPTDTAGQLHCRGTPLQHQEGSTSVTLPPELESRTVRNYPEDWAELDTRAVDTA RVLAADAVENCGSGHPGTAMSLAPLAYTLYQRVLRHDPTDPSWVGRDRFVLSAGHSSLTQYIQLYLGGFGLELDDLKALR TWGSLTPGHPEVGHTAGVEITTGPLGQGLASAVGMAMAARRERGLLDPETPAGESPFDHNIYVIASDGDIQEGVTSEASS LAGTQQLGNLVVFWDDNSISIEDNTDIAFTEDVVARYAAYGWQTLEANAEDVVGILAAVEEAKADTSRPTFVRIRSVIGY PAPTKMNTGGVHGAALGGDEVAGVKEALGFDPAESFAVADEVIAHTRRLSERAAADRAEWQKGFDAWAAAAPEAKVLLDR ISARELPEGFDADLPTWEPGQAVATRKASEAALQALGATLPELWGGSADLAGSTNTIIKGSPSFGPESISTDAWSAEPYG RNLHFGIREHAMGAILNGIALHGGTRPYGATFLQFADYMRGAVRLGALMSTDVYYVWTHDSIGLGEDGPTHQPVEHLAAL RAIPNLSVIRPADANEAVQAWSAALKAPAAPKALIFTRQNIPVLEGTAEKAAEGVARGAYVLVESSTDVPQVILLATGSE VELAVAAAETLEADGVGTRVVSLPCMEWFEAQDADYRESVLPAAVTARVSVEAGIAMPWKAYTGLTGANISLEHFGASAD YKTLYREYGITADAVVDAARSLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-118 | 46 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 9e-114 | 44 |
