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Name : gabD5 (CVAR_0989) Accession : YP_004759416.1 Strain : Corynebacterium variabile DSM 44702 Genome accession: NC_015859 Putative virulence/resistance : Unknown Product : succinic-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1132026 - 1133504 bp Length : 1479 bp Strand : - Note : NAD-dependent aldehyde dehydrogenases DNA sequence : ATGACTGACTCCTCAACCATCTCCTCCATCCTCGCGAACGTCCCGACCGGCCTGCTCATCAACGGCGAGTGGCGCGACTC CTCCGACGGCGCCACCTTCGACGTCGAGAACCCCGCCACCGAGGAACACCTCGCCACCCTCGCCTCCGCCACCAGCGAGG ACGCCCTCGCCGCCCTCGACGCCGCAGTCGCCGTCCAGGACGAGTGGGCACGCACCTCCCCGCGCTCCCGTTCCGAGATC CTCCGCAAGGCCTTCGAACTGGTCACCGAGCGCAAGGACACCTTCGCCACCCTCATGACCCTGGAGATGGGCAAGCCGCT GGCCGAGGCCTACGGCGAGGTCACCTACGGTGCGGAGTACCTGCGCTGGTTCGCCGAGGAGACCGTCCGCCACTACGGCC GCCACACCGTCGTCCCGGAGGGCACCCTCCAGATGACCACCCGCAACAAGCCGGTCGGCCCCTGCCTGCTGATCACCCCC TGGAACTTCCCGCTGGCGATGGCCACCCGCAAGGTCGCCCCGGCGATTGCCGCCGGCTGCACCATGGTCCTCAAGCCTGC GAAGCTGACCCCGCTGACCTCCCAGTACTTCGCGCAGACCATGCTGGACGCCGGACTCCCGGCCGGTGTTCTCAATGTCG TCTCCTCGAAGTCCGCGTCCTCCATCTCTGAGCCGCTGATGGCCGACTCCCGCCTGCGCAAGGTCTCCTTCACCGGCTCC ACCCCGGTCGGCGTCACCCTGCTCAAGGCCGCCGCCGACAATGTGCTGCGCACCTCCATGGAGCTCGGCGGCAACGCCCC GGTCATCGTCTTCGAGGACGCCGACATCGACGTCGCCGTCGAGGGTGCGATGGCCGCCAAGATGCGCAACGGTGGCGAAG CCTGCACCGCCGGCAACCGCATTCTCGTCCACGAGTCGATCGTCGAGGAGTTCACCGAGAAGTTCGCCGCCAAGGTCGCC GAGCTCACGATCGGCAACGGTATGGACGAGGGCGTCAACGTCGGCGCCATGGTCGAGGCCAAGGCCGTCACCAACCTCGA GTCCCTGGTGGAGGACGCCGTCGCCGCCGGTGGCCGCGCCATCGTCGGCGGTACCCCGGTCGAGGGCAAGGGCCACTTCT TCGCCCCGACCGTCATCGCGGACGCCCCGACGTCGGCACGCGTCTTCCGCGAGGAGATCTTCGGGCCGATCGCCCCGATC TTCACCTTCTCCACCGAGGAGGAGGCCATCGCGATGGGCAACGACACCGAGTTCGGCCTGGCGTCCTACGTCTTCTCTCA GGATCCGGCGCGCATGTACCGTCTCGCCGACGGCCTGGAGTTCGGCCTCATGGGCTGGAACTCGGGCGTGATCTCGAACG CCGCTGCCCCGTTCGGTGGCGTCAAGCAGTCCGGTCTGGGCCGCGAGGGTGCCGCCGAGGGCATCGCCGAGTACTCCACC ATCCAGTACGTCGGCCAGCGCGACCCCTACGCGGGATAG Protein sequence : MTDSSTISSILANVPTGLLINGEWRDSSDGATFDVENPATEEHLATLASATSEDALAALDAAVAVQDEWARTSPRSRSEI LRKAFELVTERKDTFATLMTLEMGKPLAEAYGEVTYGAEYLRWFAEETVRHYGRHTVVPEGTLQMTTRNKPVGPCLLITP WNFPLAMATRKVAPAIAAGCTMVLKPAKLTPLTSQYFAQTMLDAGLPAGVLNVVSSKSASSISEPLMADSRLRKVSFTGS TPVGVTLLKAAADNVLRTSMELGGNAPVIVFEDADIDVAVEGAMAAKMRNGGEACTAGNRILVHESIVEEFTEKFAAKVA ELTIGNGMDEGVNVGAMVEAKAVTNLESLVEDAVAAGGRAIVGGTPVEGKGHFFAPTVIADAPTSARVFREEIFGPIAPI FTFSTEEEAIAMGNDTEFGLASYVFSQDPARMYRLADGLEFGLMGWNSGVISNAAAPFGGVKQSGLGREGAAEGIAEYST IQYVGQRDPYAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-90 | 47 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 4e-92 | 45 |
