Gene Information

Name : BPI_II1129 (BPI_II1129)
Accession : YP_004758297.1
Strain :
Genome accession: NC_015858
Putative virulence/resistance : Unknown
Product : IS3 family transposase orfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1111983 - 1112891 bp
Length : 909 bp
Strand : -
Note : -

DNA sequence :
ATGAAGTTTGCGTTCATCGACACGGAGAAGGCCCATATGTCTCTGTCACGGCTGTGCGCTTTCGCAGGCGTCAGCATCAG
CGGTTATTATGCATGGAAGCATCGTTTGCCCAGTCGTCGTCAGCTTGATGACATGATTATTCTGGCCCACATTCGTAATC
AGTTTGCGCTGTCACGTGAAACCTATGGCAGCCCTCGAATGCATGTTGAACTGAACGAAGAAGGTATTCGAGCAGGTCGT
CATCGCACGGCGCGACTGATGCGTGAAAATGGTTTGAAAGCCCGACAGAAAACGCGCTTCAAACGCACGACCGACAGCAA
TCATGGTGAGCCTGTCGCTCCCAATCTTCTGGATCAGGACTTCACTTGTGACGGACCAGATCAGAAATGGGGTGTCGATA
TCAGTTACATATGGACCGCCGAAGGCTGGTTATATCTGGCAATCGTTGTCGATCTTTATTCTCGTCGCATCATTGGCTGG
GAGGCGCGCGATCGAATGAAAAAGGACCTTGCTATTTGTGCTTTGAAGAAGGCCATTGCAATTCGGTACCCAAAGCCGGG
GCTGATCCAACACTCCGACAGGGGAAGCCAATATGCCAGTTATGAGTATCGCAAAATCCTCAAATCGCACAGCATGCTTC
CATCCATGAGCGGCAAAGGAAATTGCTATGACAATGCAATGGTGGAAACCGTCTTCAAAACGATCAAGTCGGAACTGATC
TGGCGCGCTGCATTCCAGACCAGAAATGACGCAATCAAAGCCATTGGCAAATACATTGACGGCTTCTATAATCCCGTGCG
CAGACATTCTACACTGGGCTATAAATCGCCGGTGAAATTCGAGGCAATGAACCGAAACTTAGAGACAGAAGCTCTCCACT
TTTCCGAAGCAAGTCCAGTTTCAATCTGA

Protein sequence :
MKFAFIDTEKAHMSLSRLCAFAGVSISGYYAWKHRLPSRRQLDDMIILAHIRNQFALSRETYGSPRMHVELNEEGIRAGR
HRTARLMRENGLKARQKTRFKRTTDSNHGEPVAPNLLDQDFTCDGPDQKWGVDISYIWTAEGWLYLAIVVDLYSRRIIGW
EARDRMKKDLAICALKKAIAIRYPKPGLIQHSDRGSQYASYEYRKILKSHSMLPSMSGKGNCYDNAMVETVFKTIKSELI
WRAAFQTRNDAIKAIGKYIDGFYNPVRRHSTLGYKSPVKFEAMNRNLETEALHFSEASPVSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-67 57
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-67 57
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-67 57
unnamed AAF09022.1 unknown Not tested SHI-O Protein 4e-50 46
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 9e-50 46
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-49 46
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 9e-50 46
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-49 46
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 8e-50 46
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-49 46
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 6e-50 46
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 4e-49 45
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-41 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-41 42
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 3e-41 42
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 6e-42 41
tnpB CAB61574.1 transposase B Not tested HPI Protein 6e-33 41
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 3e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPI_II1129 YP_004758297.1 IS3 family transposase orfB VFG1706 Protein 3e-50 46
BPI_II1129 YP_004758297.1 IS3 family transposase orfB VFG1631 Protein 3e-42 41