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Name : wbpM (CFU_0813) Accession : YP_004751470.1 Strain : Collimonas fungivorans Ter331 Genome accession: NC_015856 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 954805 - 956745 bp Length : 1941 bp Strand : + Note : - DNA sequence : ATGATTTCTTTCTTAAATTTATCTCGCCTTCATAAGCAGGTAATCGCCGCAACTGCGGATCTGATTCTGTTGCCTGTCAC ATTTTGCTTGGCAATATGGCTGCGCCACGATGGCCTCAGCAGTTGGTTGTTGCATCAGTATGGCCTGCTGATCGTGGCTG CGCCGTTTATTTCGATCCCTATTTTTATCAGACTGGGTTTGTATCGCGCCGTCATTCGATTCATCGACCATAAGATTGTC TATGTCGTGGTGCTTGGAGTTACTTTATCGGTAATCACTCTGGGTGCGATCGGGACATTTACGCAGACGGCGGGTTATTC CCGTGCGGTTTTCGGCATATATTGGGTTAGCGCAATTTTATATGTAGCAGCAAGTCGATTTTTGGCACGCGGATATCTGC TGCGCGTCAGCGGCATAGTGGGGGTGGTTCCGGTGGCGATTTATGGCGCGGGTCAAGCGGGAACACAATTGGCTAGTGCG CTTCGGGCAGGAAATGAATATTTGCCTGTGGCATTTATTGATGATAAAAAAGAACTACAAAAAGCAACTATTGCCGGAAT CAAAGTCTTTGATGCAGAAGACCTGCCCAATTTAATTGCGCGATACAAAGTCAAGGAAATATTACTGGCCATGCCATCCT TGAGCAAATTACAGCAAAAACATATTCTCGATAAACTTGAGCCGCTTAAGGTAAAAATTAAAGTAACGCCCCCGATCAAA AGCTTGATTAATGGTGAGTTGAGGGTGCAGGACATTCGCGAAGTGGAAATTGAAGATCTGCTCGGACGTGATCCGGTGGA GCCTAATCCGGAATTGATTTCTGCCTGTATCGTGGATAAATCTGTAATGGTGACTGGTGCCGGCGGATCCATCGGTTCTG AGCTTTGCCGTCAGATCATTCGTCAGCGGCCTTCGCGTTTGATACTGCTTGAAATGTCAGAATACGGGTTGTACGCGATT GAGCAAGAATTGAGTGAATTGCAACGAAATATTGGCTTCAACATTGAATTGCTGCCATTCCTTGGCTCCGTGTTGGAAAC TGAGAAATGTGCCCGTATCATGCGAACATTTTCGGTAGAAACGGTATATCACGCTGCAGCCTACAAGCACGTCCCATTGG TTGAGCACAATCCGATTGAAGGCATACGGAACAATGTGTTTGGTACGCTAAGTGTGGCGAAAGCCGCCATGGCCTCCGGC GTCAAATCATTTGTGCTGATTTCGACCGACAAGGCAGTACGGCCAACAAATGTAATGGGTTCTACCAAACGGTTTGCTGA GCTGATATTGCAGGCGTTTTCTCGAGTGCAAGGGAAAAGTCCATCGAAGACACGATTTTGCATGGTGCGGTTTGGTAATG TACTGGGTTCCTCCGGGTCAGTTGTGCCCTTGTTTCGCAAGCAAATCATGGCAGGTGGGCCTATAACATTGACGCATCCT GAGATCACTCGTTATTTCATGACGATTCCCGAAGCAGCGCAATTGGTGCTGCAGGCTGGCGCCATGGGACAGGGAGGGGA TGTGTTCGTGCTGGATATGGGAGAACCGGTAAAGATTATCGACCTGGCGAAGCGCATGGTCCATTTGAGCGGACTTGAAG TATTGTCTGATTTAACACCGGATGGCACCATAGAAATTAATCATGTAGGTTTGCGGCCTGGTGAAAAATTGTACGAAGAA TTATTGATTGGCGAGAATGTCGAGGGTACCGAACATCCGTTGATCATGCGTGCGCAAGAAGTTGAGATTCCGTGGGCAAT CCTGGAAGATCTTCTGGCTAAACTGGAAGATGCATGTGCCGCATTCGAATATGAGGATATACGTGCTTTGCTATTGAGAA CGGTTGCTGAATATTCACCGCAATGCGGGATTGAGGACTTTATCTGGCGAGCCAAGCATCGTATAACGGGTGCAGATGCT GGTGACGTGATGCTACATTGA Protein sequence : MISFLNLSRLHKQVIAATADLILLPVTFCLAIWLRHDGLSSWLLHQYGLLIVAAPFISIPIFIRLGLYRAVIRFIDHKIV YVVVLGVTLSVITLGAIGTFTQTAGYSRAVFGIYWVSAILYVAASRFLARGYLLRVSGIVGVVPVAIYGAGQAGTQLASA LRAGNEYLPVAFIDDKKELQKATIAGIKVFDAEDLPNLIARYKVKEILLAMPSLSKLQQKHILDKLEPLKVKIKVTPPIK SLINGELRVQDIREVEIEDLLGRDPVEPNPELISACIVDKSVMVTGAGGSIGSELCRQIIRQRPSRLILLEMSEYGLYAI EQELSELQRNIGFNIELLPFLGSVLETEKCARIMRTFSVETVYHAAAYKHVPLVEHNPIEGIRNNVFGTLSVAKAAMASG VKSFVLISTDKAVRPTNVMGSTKRFAELILQAFSRVQGKSPSKTRFCMVRFGNVLGSSGSVVPLFRKQIMAGGPITLTHP EITRYFMTIPEAAQLVLQAGAMGQGGDVFVLDMGEPVKIIDLAKRMVHLSGLEVLSDLTPDGTIEINHVGLRPGEKLYEE LLIGENVEGTEHPLIMRAQEVEIPWAILEDLLAKLEDACAAFEYEDIRALLLRTVAEYSPQCGIEDFIWRAKHRITGADA GDVMLH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-85 | 48 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 5e-82 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wbpM | YP_004751470.1 | nucleoside-diphosphate sugar epimerase/dehydratase | VFG0029 | Protein | 6e-134 | 51 |
| wbpM | YP_004751470.1 | nucleoside-diphosphate sugar epimerase/dehydratase | VFG1300 | Protein | 4e-80 | 45 |
