Gene Information

Name : gabD2 (CFU_4378)
Accession : YP_004755022.1
Strain : Collimonas fungivorans Ter331
Genome accession: NC_015856
Putative virulence/resistance : Unknown
Product : succinic semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.16
Position : 5101851 - 5103347 bp
Length : 1497 bp
Strand : -
Note : -

DNA sequence :
ATGTCGCAACTGCGTGCCTTCAATGTTCATAGGAGTCAGCCCATGATGCAATTAAAAGATCCCTCGTTGTTCCGCCAGCA
AGCCTATGTCAACGGCGAGTGGTGCGGCGCCGACAGCGGCGCCACCCATGCCGTGACCAATCCGGCCACCGGCGAAACCA
TAGGCAGCGTGCCGCTGATGGGCGCCGCCGAAACCAGGCGCGCGATCGCCGCCGCAGATCAAGCCTGGCGCCAGTGGCGG
CGCAAGACCGCCAAGGAACGCAGCATCGTGCTGCGCAAATGGAACGACCTGATGCTGGCAAACCAGGACGACCTGGCGCT
GATCATGACCGTCGAACAAGGCAAGCCGCTGGCCGAGGCCAAGGGCGAAATCGCCTACGCCGCGTCGTTCATCGAATGGT
TTGCGGAAGAGGGCAAGCGCGCCGGCGGCGACACCATTCCTTCACCGTCGCCGGGTTCGCGGATCGTGGTGGTGAAAGAA
CCGATCGGCGTTTGCGCCGCGATCACGCCGTGGAATTTTCCGGCTGCGATGATTACCCGCAAGGCCGGCCCGGCGCTGGC
GGCAGGATGCACCATGGTGCTCAAGCCGGCCGAATCGACGCCGTTCTCGGCGCTGGCGCTGGCGGTGCTGGCCGAGCGCG
CCGGCATTCCCGCCGGCGTGTTCAGCGTGGTGACCGGCTCCGCGCGCGAAATCGGCGCGGAAATGACCAGCAATCCGGTG
GTGCGCAAACTGACGTTTACCGGCTCAACCGGGGTCGGCCGTTTGCTGATGGAGCAGTGCGCCGCCACCATCAAGAAACT
GTCGCTGGAACTGGGCGGCAACGCGCCGTTCATCGTGTTCGACGACGCCGACCTGGATGCGGCGGTGGAAGGCGCCATGG
CGTCCAAATACCGCAACGCCGGCCAGACCTGTGTCTGCGCCAATCGCCTGTATGTGCAAGATGGCATCTACGATGCCTTC
GCCGAAAAACTGGTGGCTGCGGTAGCCAAGCTGAAAGTCGGCGATGGCCAGCAGGAAGGCGTCACGCAAGGTCCGCTGAT
CGATCAGAAGGCTGTCGCCAAGGTCGAGCAGCATATTGCCGACGCGGTATCCAAAGGCGCGCGCGTCCTGGCCGGCGGCA
AGCGCCATGCGCTTGGCCAGAGTTTCTTCGAGCCGACCGTGCTGGCCGACGTCACCGCCGACATGATGGTGGCGCGCGAA
GAAACCTTCGGCCCGATGGCGCCGCTGTTCCGTTTCAAGACCGACGACGAAGTGCTGGCGCTGGCCAACGATACCGAATT
CGGCCTCGCCAGTTATTTCTACTCGCGCGATATCGGCCGCATCTGGCGCATTGCCGAAGGCCTGGAAAGCGGCATGGTCG
GCATCAACACCGGCCTGATATCGAATGAAGTGGCGCCGTTCGGCGGCGTCAAGCAATCGGGCCTGGGGCGCGAAGGGTCG
AAATACGGGATTGAAGATTACCAGGTGATTAAGTACCTGTGCATGGGCGGAATCTGA

Protein sequence :
MSQLRAFNVHRSQPMMQLKDPSLFRQQAYVNGEWCGADSGATHAVTNPATGETIGSVPLMGAAETRRAIAAADQAWRQWR
RKTAKERSIVLRKWNDLMLANQDDLALIMTVEQGKPLAEAKGEIAYAASFIEWFAEEGKRAGGDTIPSPSPGSRIVVVKE
PIGVCAAITPWNFPAAMITRKAGPALAAGCTMVLKPAESTPFSALALAVLAERAGIPAGVFSVVTGSAREIGAEMTSNPV
VRKLTFTGSTGVGRLLMEQCAATIKKLSLELGGNAPFIVFDDADLDAAVEGAMASKYRNAGQTCVCANRLYVQDGIYDAF
AEKLVAAVAKLKVGDGQQEGVTQGPLIDQKAVAKVEQHIADAVSKGARVLAGGKRHALGQSFFEPTVLADVTADMMVARE
ETFGPMAPLFRFKTDDEVLALANDTEFGLASYFYSRDIGRIWRIAEGLESGMVGINTGLISNEVAPFGGVKQSGLGREGS
KYGIEDYQVIKYLCMGGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 3e-151 70