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Name : hrcU (CFU_4342) Accession : YP_004754986.1 Strain : Collimonas fungivorans Ter331 Genome accession: NC_015856 Putative virulence/resistance : Virulence Product : type III secretion inner membrane protein Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 5064841 - 5065908 bp Length : 1068 bp Strand : + Note : - DNA sequence : ATGTCCGACGAAAAAACCGAAGAGCCCAGTGAGAAGAAACTGACCGACGCCCGGCGCGACGGCGAAACGTCGAAAAGCCA GGATTTGCCATTTGCGGCAATTCTATTCAGCGCGGCGATCGGTTTCTCGCTGGGCGGCCCTGTCATGACGGAACAATTGC GTTTGCTGCTGCGCATGGGGCTCGACGTTGCGAATGCACAATCGGAAAATTTCAGCTATACCGATGCGCTGGTAACTGCC GGCACGCGCGGCTTGGCCCTTTGCCTACCGATAGCGCTGCTGGCCACATTGATTTCGGCCGCCGTGATTGCAGCGCAAGT CGGATTGCAGCTCGCTTTCAAGCCGCTGGAGCTGAAATTCAATTCAATCAATCCGGCATCGGGACTGAAACGGATCTTTT CGATGCGCTCGATGATAGAGCTGGCAAAAACCGTGATCAAAGCTTGCATTCTGGGCGCGGTATTGTGGAAAACCGTGCTG ATACTGATGCCATTGCTGATTGGGGTCGTATACCAGCCGATTCTGGGATTGGACAACATCGCCTGGGGCGCTCTGTGCAA GATGCTGGCCATCTCTGCCGTCGTTTTCCTGGTGATAGGCACGGCCGATTTTGCTATCCAGCGCTGGCTGTTCATCCGCG ACCACCGCATGAGCAAGGATGAAGTCAAACGGGAGAACAAGGAAAGCAACGGCAATCCGCAAATCAAGCAAGAGCTGCGC AAACTGTCAAAAGAACTTGCCAACGCGCCGCAGAAATCGCATGTGGGACAGGCGAATGTGGTAGTGGTCAATCCGACCCA CTACGCGGTCGCCCTGCGCTACGCGCCAGAAGAATGCGGCTTGCCGCGCGTCATCGCCAAAGGCACCGATGACGAAGCGC GCGTCATCCGTGAACTGGCGGCTTTGCATGGCGTCCCGATCGTCGGCAACCCGCCATTGGCGCGCGCGCTTTATCTGGTT GCTCTGGAAGAAACCATCCCCGAACCCCTTTTCGACGCGGTAGCGGCAGTGCTCGCCTGGGTTGACGATATGGGCAAAGG CCACACCACAGCTGTCAATCCAGCTTGA Protein sequence : MSDEKTEEPSEKKLTDARRDGETSKSQDLPFAAILFSAAIGFSLGGPVMTEQLRLLLRMGLDVANAQSENFSYTDALVTA GTRGLALCLPIALLATLISAAVIAAQVGLQLAFKPLELKFNSINPASGLKRIFSMRSMIELAKTVIKACILGAVLWKTVL ILMPLLIGVVYQPILGLDNIAWGALCKMLAISAVVFLVIGTADFAIQRWLFIRDHRMSKDEVKRENKESNGNPQIKQELR KLSKELANAPQKSHVGQANVVVVNPTHYAVALRYAPEECGLPRVIAKGTDDEARVIRELAALHGVPIVGNPPLARALYLV ALEETIPEPLFDAVAAVLAWVDDMGKGHTTAVNPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | YP_362157.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-75 | 49 |
| hrcU | YP_198724.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-75 | 49 |
| XC_3012 | YP_244080.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 6e-68 | 48 |
| hrcU | NP_636604.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 6e-68 | 48 |
| hrcU | NP_640761.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-75 | 48 |
| hrcU | AAP34345.1 | HrcU | Virulence | Hrp PAI | Protein | 5e-73 | 48 |
| hrcU | BAB07858.1 | HrcU | Virulence | Hrp PAI | Protein | 4e-75 | 48 |
