Gene Information

Name : hrcT (CFU_4334)
Accession : YP_004754978.1
Strain : Collimonas fungivorans Ter331
Genome accession: NC_015856
Putative virulence/resistance : Virulence
Product : HrcT protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 5058698 - 5059567 bp
Length : 870 bp
Strand : -
Note : -

DNA sequence :
ATGAATGAATTAACGGTTCTGAGCAATACGCTGCTGTCCTTGTACACGGCTTATCACAATCTGATTGTCATGATGCTGCT
CGCCGGCATGCGCATCATGATTGTATTTCTCGTATTTCCTCCTACCAGCGATCAGGCGATACCGGGCATAGCCCGCAACG
GCGTCATCTATTTACTTACCTATTTCGTGACGGCAGGACAAAGTCCTGAAGCTTTTGAAAGCTTGAATAGCGCGACGCTG
CTGGTCCTGACGGCAAAGGAAGCTTTTCTTGGACTGGCGTTCGGATATTCGGCCGCCACGGCATTCTGGATCGCGCAGAG
CGTCGGCACGCTGATCGACGATCTGGCCGGGTTCAATAATATTCAGATGAGCAATCCGCTGCGCGGCGATCAAAGCACGC
CGGTGTCGACAGTGCTGATGCAACTTGTGGTTACCTTGTTCTACGTTGGCGGCGGCATGATCTTCATACTCGGTGCTTTG
TTCCAGTCATTCAAATGGTGGCCGGTAGAACAGCTTATGCCATCGCTCTCGAGCACCGCCGAGGCTTTCCTGATTCAACG
CACGGACTCGCTCTGGACCGGCATCGCCAAACTCGGTACGCCAATCATGCTGGTGCTGGTGTTGATTGAAATTGGCATAG
GCTTGATTTCCCGCGCGGCAGATAAACTTGAGCCGAACTCGCTGAGCCAGCCGCTGCGCGGCGCGGTCGGCCTGGTGATG
GTCATCGCGCTGACGGCGGTGTTCGCAGGGCAGGTTGTAAACGATATCAAATTTCTGGGTTTCGGCCGGGCGTTAAGCGC
CGGGATGGTCGGTAATTCACAAGACAACTCGCAAGATAAATCGACGCCGGAAATTACATTGAAAAAGTGA

Protein sequence :
MNELTVLSNTLLSLYTAYHNLIVMMLLAGMRIMIVFLVFPPTSDQAIPGIARNGVIYLLTYFVTAGQSPEAFESLNSATL
LVLTAKEAFLGLAFGYSAATAFWIAQSVGTLIDDLAGFNNIQMSNPLRGDQSTPVSTVLMQLVVTLFYVGGGMIFILGAL
FQSFKWWPVEQLMPSLSSTAEAFLIQRTDSLWTGIAKLGTPIMLVLVLIEIGIGLISRAADKLEPNSLSQPLRGAVGLVM
VIALTAVFAGQVVNDIKFLGFGRALSAGMVGNSQDNSQDKSTPEITLKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB8 AAB08463.1 HrpB8 Virulence Hrp PAI Protein 6e-58 50
hrcT YP_362165.1 HrcT protein Virulence Hrp PAI Protein 8e-58 50
hrcT AAP34337.1 HrcT Virulence Hrp PAI Protein 2e-58 49
hrcT NP_640769.1 HrcT protein Virulence Hrp PAI Protein 2e-58 49
hrpB8 BAB07850.1 HrpB8 Virulence Hrp PAI Protein 4e-57 48
hrpB8 AAF61279.1 HrpB8 Virulence Hrp PAI Protein 4e-57 48
hrpB8 YP_198732.1 protein HrpB8 Virulence Hrp PAI Protein 5e-57 48
XC_3004 YP_244072.1 HrpB8 protein Virulence Hrp PAI Protein 7e-59 47
hrcT NP_636612.1 HrpB8 protein Virulence Hrp PAI Protein 7e-59 47