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Name : gspE (CFU_4049) Accession : YP_004754694.1 Strain : Collimonas fungivorans Ter331 Genome accession: NC_015856 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4747643 - 4749094 bp Length : 1452 bp Strand : - Note : - DNA sequence : ATGAGCGATCCCAGGATGACCGATACGCGCCTGCTGCCCTACGCTTTCGCTCGCGATTTTTCATTGCTGGCGCAGCGTAC CGAAGATGCCAACGGCGCCGACAATGCGGTCGAGTTGTGGATTTCCGAGGCGACCAAGCCTAGCGCGATCGCCGAAGCCA GCCGCCGTTTCGGCCGCGTCAGGTTCCGCACGCTGTCGCGCGAGGAGCTCGACGAGGCGATCGCCAGGGCCTATGCCGGC GCCGGCGGCGATGCCGCGCAGGTGGTCGACGAATTCGAATCCGATCTCGATCTCGCCAAGCTGATGCAAGACATGCCGGC CATCGAAGACCTGCTGGAATCGTCCGACGACGCGCCGGTGATCCGCATGATCAACGTGCTGCTGACGCAAGCGCTGCGCG AAGGCGCTTCCGATATCCACATCGAACCGTTCGAGCAGATTTCGGTAGTGCGTTTCCGCATCGACGGCAGCCTGCGCGAT GTGGTGCGGCCGAAAAAAGCGGTCCATGCCTCCCTGATTTCCCGTATCAAGATCATGGCGCAGCTCGATATCGCCGAAAA ACGTTTGCCGCAGGACGGCCGCATTACCTTGCGCGTCGGCGGCAAGCCGGTGGACGTGCGGGTGTCGACCTTGCCGACCG GCCACGGCGAACGCGCCGTGCTGCGCCTGCTGGACAAGGAAGCCGGCCGGCTCGATCTGCAGCACCTGGGTATGAGCCCG GCAGTCCTGCCGCAGTTCGACCGCCTGATCGCGCAGCCGCACGGCATCGTGCTGGTCACCGGGCCGACCGGCTCGGGCAA GACCACCACGCTGTACGCGGCATTGTCGCGCCTGAATACCAGCAGCACCAATATCCTGACGGTGGAAGATCCGATCGAGT ACGAACTGGCCGGGGTCGGCCAGACCCAGGTCAATGCGCGCATCGACATGACGTTCGCCAAAGCCTTGCGGGCGATCTTG CGGCAGGATCCGGATGTCATCATGATCGGTGAAATCCGCGACCTGGAAACCGCGCAGATCGCGGTGCAGGCTTCGCTGAC CGGCCATCTGGTGCTGGCCACCTTGCACACCAACGATTCCGCCGCCGCGGTGACGCGGTTGCTGGACATGGGGATCGAAC CCTTCCTGCTGTCGTCTTCCCTGCTGGGAGTGGTCGCGCAGCGCCTGGTGCGCAAGCTATGCACCCATTGCCGCCGCCAC GACGGCCAGCTGTGGCACGCGGTCGGCTGCGAGCAATGCGGCCACACCGGCTACCACGGCCGGGTCGGCGTCTACGAGTT GTTGCTGACTACCGATGAAATTACCGCACAGATCCATAACCGGGCCTCGGAAGCCGAGATCCAGCAGGTGGCGCAGCGCA ATGGCATGCGCACCATGCGCCAGGATGGCGAACGCTGGCTGACCGAAGGCATCACGACCCAGGCCGAGCTGCTGCGGGTC ACCAAAGAATGA Protein sequence : MSDPRMTDTRLLPYAFARDFSLLAQRTEDANGADNAVELWISEATKPSAIAEASRRFGRVRFRTLSREELDEAIARAYAG AGGDAAQVVDEFESDLDLAKLMQDMPAIEDLLESSDDAPVIRMINVLLTQALREGASDIHIEPFEQISVVRFRIDGSLRD VVRPKKAVHASLISRIKIMAQLDIAEKRLPQDGRITLRVGGKPVDVRVSTLPTGHGERAVLRLLDKEAGRLDLQHLGMSP AVLPQFDRLIAQPHGIVLVTGPTGSGKTTTLYAALSRLNTSSTNILTVEDPIEYELAGVGQTQVNARIDMTFAKALRAIL RQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDSAAAVTRLLDMGIEPFLLSSSLLGVVAQRLVRKLCTHCRRH DGQLWHAVGCEQCGHTGYHGRVGVYELLLTTDEITAQIHNRASEAEIQQVAQRNGMRTMRQDGERWLTEGITTQAELLRV TKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-109 | 50 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-109 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_004754694.1 | general secretion pathway protein E | VFG0182 | Protein | 4e-119 | 57 |
| gspE | YP_004754694.1 | general secretion pathway protein E | VFG1876 | Protein | 2e-113 | 56 |
| gspE | YP_004754694.1 | general secretion pathway protein E | VFG2048 | Protein | 1e-107 | 49 |
| gspE | YP_004754694.1 | general secretion pathway protein E | VFG0233 | Protein | 1e-86 | 48 |
| gspE | YP_004754694.1 | general secretion pathway protein E | VFG0112 | Protein | 2e-85 | 46 |
| gspE | YP_004754694.1 | general secretion pathway protein E | VFG2426 | Protein | 2e-71 | 45 |
