|
Name : gspF (CFU_4048) Accession : YP_004754693.1 Strain : Collimonas fungivorans Ter331 Genome accession: NC_015856 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 4746391 - 4747611 bp Length : 1221 bp Strand : - Note : - DNA sequence : GTGCCAGCATTTCGTTACGAAGCGGTAGATACCGCCGGCAGCACCACCAAGGGCGTGGTGAATGCGGACAGCGCCAAGAT GGCGCGCGCCGATCTGCGCGCCCAGGGGTTGCTGCCGCTGACGGTAGAAGCGATCGCGCAGCAGGTGGATGCTGCCGGCA ACCTGAAACGGCGCGGTTTTGGCGAGCATCTGTCGACGGTGGAGATCGCCTTGTTTACGCGCCAGCTGGCCAGCCTGCTG GAAGCCAGCCTGCCATTGGAGCAAGCCCTGACGGCGTTGCTGGAACAGGCCGAGCGCAGTTACCAGCGCGACCTGATCGC ATCGATCCGGTCCGAGGTCATGGGCGGCGCTTCCTTGTCTTCGGCGCTGGCTGGCCATCCGCGCGACTTCGCGGAAATCT ACCGGGCGCTGGTTGCTTCGGGCGAGCAGATCGGCCAGTTGTCGCGTGTGCTGTCGCGGCTGGCCGATTATATCGAGCGC CGCAATTCGCTGGTGCAGAAGGTGAAACTGGCGTTTACCTATCCGGCGATCGTGACCGTGGTGGCGTTCGTGATTGTGAT TTTCCTGTTGACCTACGTGGTGCCGCAGATCGTTTCGGTATTCGCCAACACCAAGCAGAAGCTGCCGATGCTGACCGTGA TGATGCTCGCCACTTCGGACTTTGTACGCAACTATGGCTGGATGGTCCTGATCGTGGTGATCGCGTTGTTCTACAGCTGG CGCATGGCGCTGAAAAACCCGGCGACCAAGATGCGCTGGCATACCTGGCTGCTGAATGCGCCGCTGTATGGAAAATTCGA GCGCAGCCTGAATACCGCGCGGTTTGCCAGTACGCTGGCGATTACCACCGGCTCCGGCGTGCCGATCCTGAAAGCCCTGC AAACCAGCCGCGATACGCTGTCCAATGTCGCCATGCGGCAGCAGGTCGATACCGCCGCCACCAGCGTGCGTGAAGGCGTG GGCCTGGCGCGCGCGCTGGCCGCGCACAAGCATTTTCCGCCGATGCTGATCCACATGATACGGGCCGGCGAGGTGACCGG CGAATTGCCCGCCATGCTGGAGCGCGCCGCCAGCGCCCAGGAACAGGACCTGGAACGGCGCGCCATGACCATCGCCGGCT TGCTGGAACCGGCCCTGATCTTGGCGATGGGGGTAGTGGTGCTGTTGATCGTGCTGGCGGTGCTGATGCCGATTATTGAA ATCAACCAGCTGGTGCGTTAG Protein sequence : MPAFRYEAVDTAGSTTKGVVNADSAKMARADLRAQGLLPLTVEAIAQQVDAAGNLKRRGFGEHLSTVEIALFTRQLASLL EASLPLEQALTALLEQAERSYQRDLIASIRSEVMGGASLSSALAGHPRDFAEIYRALVASGEQIGQLSRVLSRLADYIER RNSLVQKVKLAFTYPAIVTVVAFVIVIFLLTYVVPQIVSVFANTKQKLPMLTVMMLATSDFVRNYGWMVLIVVIALFYSW RMALKNPATKMRWHTWLLNAPLYGKFERSLNTARFASTLAITTGSGVPILKALQTSRDTLSNVAMRQQVDTAATSVREGV GLARALAAHKHFPPMLIHMIRAGEVTGELPAMLERAASAQEQDLERRAMTIAGLLEPALILAMGVVVLLIVLAVLMPIIE INQLVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 5e-43 | 42 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-43 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF | YP_004754693.1 | general secretion pathway protein F | VFG0181 | Protein | 4e-58 | 45 |
| gspF | YP_004754693.1 | general secretion pathway protein F | VFG1870 | Protein | 1e-54 | 42 |
