Gene Information

Name : CFU_3821 (CFU_3821)
Accession : YP_004754468.1
Strain : Collimonas fungivorans Ter331
Genome accession: NC_015856
Putative virulence/resistance : Virulence
Product : response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4496693 - 4497436 bp
Length : 744 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCATCCTGCTTGCCGAAGACGACAGTGTTCTAGCCGATGGACTGACGCGTTCGCTGCGCCAGTCGGGTTATGCCAC
CGACTGCGTGATGAACGGCATGGAAGCGGATTCGGCTCTCTCGACCCAGGATTTCGACCTGCTGATCCTGGACCTGGGCT
TGCCCAAGATGACCGGCCTGGAGGTATTGCGCCGCCTGCGCGCCAGGAATTCGCGGCTGCCGGTGCTGATCCTGACTGCG
GCAGATTCCCTGGAGCAACGAGTCAAGGGCCTGGACCTGGGCGCCGACGACTACATGGCCAAGCCGTTCGAACTGTCCGA
GCTGGAAGCGCGGGTGCGCGCCCTGACCCGGCGCGGCGCCGGCGGCGGCCCTACCGTCATCAAGCACGGCCCGCTGAGTT
ACGACCAGGTCGGACGGATCGCCTATATCAATGAGCAGATGCTGGACTTGTCGGCGCGCGAACTGGGTTTGCTGGAAGTA
TTGCTGCAGCGGACCGGCCGCCTGGTTTCCAAGGAACAGCTGGTCGACCACCTGTGCGAATGGGGCGAAGAAGTCAGCAA
CAACGCCATCGAGGTGTATGTGCATCGCTTGCGCAAGAAAATCGAAGTCGGCGGCGTGCGGATCGCCACGGTGCGCGGCC
TCGGTTATTGCCTGGAAAAAATCAGCGAGCCGCAAGCCGCTGCCGCGGGTCCGGCAGCTTCCTCTGCTCCGCTCTCGCCG
CTCGACGCCTCCAGCCGCCGCTGA

Protein sequence : 
MRILLAEDDSVLADGLTRSLRQSGYATDCVMNGMEADSALSTQDFDLLILDLGLPKMTGLEVLRRLRARNSRLPVLILTA
ADSLEQRVKGLDLGADDYMAKPFELSELEARVRALTRRGAGGGPTVIKHGPLSYDQVGRIAYINEQMLDLSARELGLLEV
LLQRTGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEVGGVRIATVRGLGYCLEKISEPQAAAAGPAASSAPLSP
LDASSRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-38 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFU_3821 YP_004754468.1 response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein BAC0487 Protein 4e-39 44
CFU_3821 YP_004754468.1 response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein BAC0083 Protein 2e-34 43
CFU_3821 YP_004754468.1 response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein BAC0638 Protein 6e-28 43
CFU_3821 YP_004754468.1 response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein NC_002516.2.879194.p Protein 2e-32 43
CFU_3821 YP_004754468.1 response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein BAC0308 Protein 8e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFU_3821 YP_004754468.1 response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein VFG0473 Protein 6e-41 44
CFU_3821 YP_004754468.1 response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein VFG1390 Protein 4e-33 41