Gene Information

Name : xerD (CFU_3564)
Accession : YP_004754211.1
Strain : Collimonas fungivorans Ter331
Genome accession: NC_015856
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 4155652 - 4156590 bp
Length : 939 bp
Strand : -
Note : -

DNA sequence :
GTGAGAAGGTCCAAGGCACAGAGCGAAGCCAAACCGGCGCTGAGCGCCGAACATCAAACCGCGATCGACGAATTCTGCGA
CAACCTGTGGCTGGAAGACGGCCTCGCCAAGAATTCGCTGGAGGCATACCGGCGCGACATGACCCTGTTTGCGCTGTGGC
TGCAGGAACAGCCGGACGGTAAATCGCTGTTCGCAGTCCATGCCGGCGACCTGAATGCCTATTTCCTGGCCAGGCACGAC
AGCAGCAAGGCCACTTCATCGAACCGCCGGCTGGCGGTGCTGAAGCGCTTTTACCTGCTAGCCTTACGGCAAAACCGCAT
CAGTGCCGATCCTTGCCTGCACCTGCGTTCGGCCAAACAGGCGCCGCGCTTTCCCAAGATCTTGTCCGAAATTCAGGTGG
AAGCGCTGCTGGCGGCGCCCGACGTCGCCACGCCGCTGGGCTTGCGCGACCGCACCATGCTGGAGCTGATGTACGCCAGC
GGCTTGCGGGTATCCGAGCTGGTGCTGCTGAAATCGCTGGAGGTCGGCATGAACGAAGGCGTGCTGCGGATTACCGGCAA
AGGCAACAAGACGCGCCTGCTGCCGTTCGGCGAAGAGGCGCGCAACTGGATCGTGCGTTATCTGAAAGATGCGCGCGGCC
AGATCATGAACGGCCAGATGGACGACGCCCTGTTCGTGACCGCGCGCGGCGGCGCCATGACGCGCCAGATGTTCTGGACC
CTGATCAAGAAATACGCCGCCAAGGCCGCGATCAACGCGCCCTTGTCGCCGCATACCTTGCGCCATGCATTCGCCACCCA
TCTGCTCAATCACGGCGCCGACCTGCGGGTAGTGCAGCTGCTGCTGGGACATGCGGATATCTCGACTACCCAGATTTACA
CCCATGTGGCGCGCGAGCGCCTGAAGGCGCTGCATGCCGCACATCATCCGCGCGGCTGA

Protein sequence :
MRRSKAQSEAKPALSAEHQTAIDEFCDNLWLEDGLAKNSLEAYRRDMTLFALWLQEQPDGKSLFAVHAGDLNAYFLARHD
SSKATSSNRRLAVLKRFYLLALRQNRISADPCLHLRSAKQAPRFPKILSEIQVEALLAAPDVATPLGLRDRTMLELMYAS
GLRVSELVLLKSLEVGMNEGVLRITGKGNKTRLLPFGEEARNWIVRYLKDARGQIMNGQMDDALFVTARGGAMTRQMFWT
LIKKYAAKAAINAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKALHAAHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-50 56
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-50 56