Gene Information

Name : ygiX (CFU_3347)
Accession : YP_004753994.1
Strain : Collimonas fungivorans Ter331
Genome accession: NC_015856
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3905629 - 3906330 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence :
GTGTTTAAATACGAGGCTATGAAAATACTGCTGATAGAAGACGATCTGGACCTGGGCAATGGCGTGCGCATTGCCCTGAC
AGACCATGGCATGGACGTGGTGTGGGTGCGCCAGCTGGAGGATGCGCTGCGCCACCTGGAATCCGACACCTGCGATCTAG
TGCTGCTGGATCTGGGTTTGCCCGACGGCGACGGCCTCAGCCTGCTGACGCGCCTGCGTCGTGAAAAGAAGGGGCTGCCG
GTAATCATCCTGAGCGCCCGCGATGCGGTCAGCGACCGCCTGCTTGGCCTCGACAGCGGCGCCGACGATTACCTGGTCAA
GCCGTTCGTGCTGGCGGAACTGCTGTCGCGCGTGCGGGCGCTGGCGCGGCGCAGCTACGGCTTCGACGGCGAGACCCTGG
AATTGCGCGGCCTGTCGCTGCATGCGCCGACCCGCCGTGTCTCCGTGCAGGAGCGTCCGGTAGAGCTGACCGCCAGCGAA
TATGCCTTGCTCAGCACCTTGCTGATACGCGCCGACCGGGTGGTGACGCGGCGCATCCTGGAAGACCTGGCGCTGCCCGG
CGGCCAGGGCAACGCCAGCAATACCTTGGATGTGCACATGGCCAACCTGCGGCGCAAGATCGGCGACGGTTATATCCGCA
CCGTGCGCGGCGTCGGCTTCGTGATAGACCTGCAGGCGCCGGCCCGCAGCGTCCGCAAATGA

Protein sequence :
MFKYEAMKILLIEDDLDLGNGVRIALTDHGMDVVWVRQLEDALRHLESDTCDLVLLDLGLPDGDGLSLLTRLRREKKGLP
VIILSARDAVSDRLLGLDSGADDYLVKPFVLAELLSRVRALARRSYGFDGETLELRGLSLHAPTRRVSVQERPVELTASE
YALLSTLLIRADRVVTRRILEDLALPGGQGNASNTLDVHMANLRRKIGDGYIRTVRGVGFVIDLQAPARSVRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-15 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ygiX YP_004753994.1 winged helix family two component transcriptional regulator VFG1390 Protein 4e-17 41