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Name : lysS (CFU_3121) Accession : YP_004753769.1 Strain : Collimonas fungivorans Ter331 Genome accession: NC_015856 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 3668271 - 3669797 bp Length : 1527 bp Strand : + Note : - DNA sequence : ATGACGACAGACAATCAGCAGCAACCTGTCCCGCAAGACGAAAACAAGATCATTGCGGAACGCCGCAACAAGCTCGGCGC CCTGCGCGCCCAAGGTGTGGCTTTCCCCAACGATTTCCGGCCGACGCACAAGGCAGCCGCGATCCAGGCCGAATACGCCG CCCAGGAAAACGAAACGCTGGACGTGGCCGCAGTCAAGGTCGTGGTCGCCGGCCGCATGATGCTGAAACGGGTGATGGGC AAGGCTTCCTTCGCGACCCTGCAGGATGCTTCGGGCAGCAAGGCCGACGGCCGCATCCAGCTGTTCATCACCAAGGAAAA CATCGGCGAAGAGAACTACGACAGCTTCAAGCATTACGACCTGGGCGACATCCTCGGCGCCGAAGGCACGCTGTTCAAGA CCAAGACCGGCGAACTGTCGATCAAGGTCACCACGCTGCGCTTGCTGACCAAATCGCTGCGCCCGCTGCCGGACAAGTTC CACGGCCTGGCCGACCAGGAAACCAAGTACCGCCAGCGCTACGTCGACCTGATCATCAACGAAGATACGCGCCGCACTTT CAAGGTGCGCACCGCTGCGATGTCGTCGATCCGCCGCTTCATGGAACAGAACGACTTCATGGAAGTCGAAACGCCGATGC TGCACGCCATCCCCGGCGGCGCCGCGGCCAAGCCTTTCATCACCCATCACAATGCGCTGGACATGCAGATGTTCCTGCGC ATCGCGCCTGAGCTGTACCTGAAGCGGCTGGTGGTCGGCGGTTTCGAACGCGTGTTTGAAGTCAACCGCAACTTCCGTAA TGAAGGCGTATCGCCGCGCCACAATCCTGAATTCACGATGATGGAATTCTATGCGGCTTATGTCGATTACCAATGGCTGA TGAACTTCACCGAACAGGTGATCCGCCAGGCCGCGATCGATGCCCACGGCACCGCCACCCTGACCTACCAGGGCCGCGAG CTGGACCTGAGCAAGCCGTTCCAGCGCCTGACCATCGTCGGCGCCATCAACAAGTACGCGCCGCAATACCAGGACGCGCA ATTGCAGGATGCGGAATTCATCAAGGCCGAGCTGAAGAAATTCGGCGTCAAGCCGCATGCCCACGCCGGCCTCGGCGCGC TGCAGCTGGCCCTGTTTGAAGAAACCGCCGAAGCGCAGTTGTGGGATCCGACCTACATCGTCGACTATCCGGTCGAAGTA TCGCCGCTGGCGCGCGCTTCCGATACCGTGCCCGGCATCACCGAGCGTTTCGAGCTGTTCGTCACCGGCCGCGAAATCGC CAACGGCTTCTCCGAGCTGAACGATTCGGAAGACCAGGCCGCCCGCTTCCAGGCGCAGGTTGCAGCCAAGGACGCCGGCG ACGAAGAAGCCATGTATTACGACGCCGACTACATCCGCGCGCTGGAGTACGGCATGCCTCCGACCGGCGGCTGCGGCATC GGCATCGACCGCCTGATGATGCTGATCACCGACTCGCCCAACATCCGCGACGTGCTCCTGTTCCCGCATCTGCGCCGCGA AGACTAA Protein sequence : MTTDNQQQPVPQDENKIIAERRNKLGALRAQGVAFPNDFRPTHKAAAIQAEYAAQENETLDVAAVKVVVAGRMMLKRVMG KASFATLQDASGSKADGRIQLFITKENIGEENYDSFKHYDLGDILGAEGTLFKTKTGELSIKVTTLRLLTKSLRPLPDKF HGLADQETKYRQRYVDLIINEDTRRTFKVRTAAMSSIRRFMEQNDFMEVETPMLHAIPGGAAAKPFITHHNALDMQMFLR IAPELYLKRLVVGGFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAYVDYQWLMNFTEQVIRQAAIDAHGTATLTYQGRE LDLSKPFQRLTIVGAINKYAPQYQDAQLQDAEFIKAELKKFGVKPHAHAGLGALQLALFEETAEAQLWDPTYIVDYPVEV SPLARASDTVPGITERFELFVTGREIANGFSELNDSEDQAARFQAQVAAKDAGDEEAMYYDADYIRALEYGMPPTGGCGI GIDRLMMLITDSPNIRDVLLFPHLRRED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-130 | 56 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 8e-82 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004753769.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 8e-131 | 56 |
