Gene Information

Name : ycfV (CFU_1851)
Accession : YP_004752506.1
Strain : Collimonas fungivorans Ter331
Genome accession: NC_015856
Putative virulence/resistance : Resistance
Product : methionine ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.25
Position : 2192210 - 2192908 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence :
ATGCACACCACAACCGAAACGACATCCGATTTCATCCCCGACCTGGTCCCCACGCTGGAATGCCGCGGCCTGCGCAAGTC
TTATGCGCATGGCCGGGTGGTGCTGGCGCATCTCGACTTCTCGCTGGCGGCCGGCGAATACGTCGCCATCATGGGCGATT
CCGGCGTCGGCAAGTCGACCTTGCTCAACCTGATCGCCGGCCTCGACAGCGCCAACAGCGGCTCGATACTGATCGACGGC
GTCAGCATGTCGAGCCTGGACGACGATGCCGCTACCCTGCTGCGCCGGCAGAAACTCGGCTTCATTTTCCAGGCCTTCCA
TGTACTGCCGCACCTGACCTTGCAGCAGAATGTCGCCCTGCCGCTGCTGCTCAACGGCGCGCCGCTGGAACGCGCGCTGG
AACTGCTGGCGGCGGTCGGGCTGGCCGGCCGCGGCAACGATTTCCCGCGCCAGCTGTCGGGCGGTGAAATGCAAAGGGTG
GCGATTGCGCGCGCCCTGGTGCACCGCCCCAAGCTGATCCTGGCCGACGAACCTACCGGCAACCTCGATCCCGATACCGC
GCATGAAGTGCTGGCCCTGCTGCGCCAGGAAATCAAGGCCAACGGCGCCTCGGCCATCGTGGTCACCCATTCCGCCGCCG
CGGCCGCCAGCGCCGACCGCGTCCTGGTCATGAGCGCAGACGGCCTGCAGCCGCAATGA

Protein sequence :
MHTTTETTSDFIPDLVPTLECRGLRKSYAHGRVVLAHLDFSLAAGEYVAIMGDSGVGKSTLLNLIAGLDSANSGSILIDG
VSMSSLDDDAATLLRRQKLGFIFQAFHVLPHLTLQQNVALPLLLNGAPLERALELLAAVGLAGRGNDFPRQLSGGEMQRV
AIARALVHRPKLILADEPTGNLDPDTAHEVLALLRQEIKANGASAIVVTHSAAAAASADRVLVMSADGLQPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-25 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-21 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-24 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-24 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ycfV YP_004752506.1 methionine ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-34 46
ycfV YP_004752506.1 methionine ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-25 45
ycfV YP_004752506.1 methionine ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 5e-26 44
ycfV YP_004752506.1 methionine ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-26 44