Gene Information

Name : CFU_1534 (CFU_1534)
Accession : YP_004752189.1
Strain : Collimonas fungivorans Ter331
Genome accession: NC_015856
Putative virulence/resistance : Virulence
Product : response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1812764 - 1813432 bp
Length : 669 bp
Strand : +
Note : -

DNA sequence : 
GTGCATATTCTTTTGGTGGAAGACGATTCGGTGCTGGCGGACGGCATCCTGCGCATCTTCAAAGGCCACGGCATGGTGGT
CGACGTGGTACGGAACGGCAACGACGCCGATGCGCTGCTGCAGCGCACGGAAATTTCGGTGGTAGTGCTGGATATCGGCT
TGCCGGGCATGGACGGCTTTGAAGTGATCCGCCGCCTGCGCGCGCGCGGCAGCCACATCCCGGTGCTGCTGCTGACCGCG
CGCGATTCGGTGCAGGACCGGGTCTACGGCCTGGAGCTGGGGGCCGACGATTACCTGGTGAAACCGTTTGCCACCCAGGA
GCTGGTGGCCAGGGTGCGCGCGCTGTTGCGCCGCAGTGCGCCGCAGCCGCTGGAGATGCACTTGGGCGGACTGTCGCTGA
ACACCTCCTCACGGCGCGCAAAAATCAACGGCAAGGCGATCGAGCTGTCGGTGCGTGAATGGGCAGTGCTTGAATACCTG
CTGCAGCAGGCGTCGCGCGTCGTATCGCGGCAGCAGATCATCGACGCCATCCTGCCCTGGGGCGCGGAGCTGACGCTGAA
CGCGGTGGAGGTGTACATATCCAGGATCCGCTTGAAAATCGCCGATGCCGGCATCGAGATCCGCACCATCCGCGGTTTCG
GCTACATGCTGGAAAAAACAGAAGCATGA

Protein sequence : 
MHILLVEDDSVLADGILRIFKGHGMVVDVVRNGNDADALLQRTEISVVVLDIGLPGMDGFEVIRRLRARGSHIPVLLLTA
RDSVQDRVYGLELGADDYLVKPFATQELVARVRALLRRSAPQPLEMHLGGLSLNTSSRRAKINGKAIELSVREWAVLEYL
LQQASRVVSRQQIIDAILPWGAELTLNAVEVYISRIRLKIADAGIEIRTIRGFGYMLEKTEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFU_1534 YP_004752189.1 response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein BAC0083 Protein 9e-28 43
CFU_1534 YP_004752189.1 response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein BAC0347 Protein 1e-25 42
CFU_1534 YP_004752189.1 response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein BAC0125 Protein 3e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFU_1534 YP_004752189.1 response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein VFG0473 Protein 1e-30 43
CFU_1534 YP_004752189.1 response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein VFG0596 Protein 2e-23 41