|
Name : kdsB (CFU_1222) Accession : YP_004751877.1 Strain : Collimonas fungivorans Ter331 Genome accession: NC_015856 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 1431838 - 1432605 bp Length : 768 bp Strand : + Note : - DNA sequence : GTGAGCTCGAACAAGTCTTTCACCGTCATCATCCCGGCGCGGCTGGCGTCTACCCGTCTGCCTAACAAGCCGCTGGCCGA CATCGGCGGCAAGCCGATGATCGTGCGCACCGCTGAGCGCGCCGCGCTATCCGGCGCGGCGCAGGTCATCGTGGCGACCG ACCACGCCGAAATCCTGGCAGTCTGCGCCCAGCATGGCATCGCCGCGCGCCTGACGCGCGCCGACCATCCTTCCGGCACC GACCGCATTGCCGAAGTGGCGGCGGCGCTGGGACTGGCGGCCGATGCCGTGGTGGTGAACGTGCAGGGCGACGAACCGAT GATCGAGCCTGAGCTGATCGCCGCTACCGCGGCGCAGATCACCGGCGAGGTGCCGATGGCGACCGCGGCGCACGCGATCG ACTCGGCAGTGGATGCCTTCAATCCGAATGTGGTCAAGGTGGTCTTGAACCAGGCCGGGCGCGCGCTGTATTTTTCGCGG GCGACGATTCCCTGGCACCGCGACGGCTTTGCACAGTCGCGCGAGGATTTGCCGGCGGCCTATGTGCCGCTGCGCCATAT CGGCCTGTACGCCTACAGCAATGGTTTTTTGCAAACCTATCCGACGCTGGCGGTGTCGCCGCTGGAACAGATCGAGGCGC TGGAGCAGCTGCGGGTGCTGTGGCACGGCTACCCGATTGCGGTGCACATTGCGCCGGCCGCGCCGGCAGTCGGCGTGGAT ACGCTGGAAGACCTGGAGCGGGTGAGGCGTTTTTTCAGCGCTCTATGA Protein sequence : MSSNKSFTVIIPARLASTRLPNKPLADIGGKPMIVRTAERAALSGAAQVIVATDHAEILAVCAQHGIAARLTRADHPSGT DRIAEVAAALGLAADAVVVNVQGDEPMIEPELIAATAAQITGEVPMATAAHAIDSAVDAFNPNVVKVVLNQAGRALYFSR ATIPWHRDGFAQSREDLPAAYVPLRHIGLYAYSNGFLQTYPTLAVSPLEQIEALEQLRVLWHGYPIAVHIAPAAPAVGVD TLEDLERVRRFFSAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 1e-24 | 42 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 9e-25 | 42 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 4e-25 | 42 |
