Gene Information

Name : CFU_0996 (CFU_0996)
Accession : YP_004751651.1
Strain : Collimonas fungivorans Ter331
Genome accession: NC_015856
Putative virulence/resistance : Unknown
Product : major capsid protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1169436 - 1170443 bp
Length : 1008 bp
Strand : +
Note : -

DNA sequence :
ATGAGAGCAAATACCCGTATCGCGTTTGAAGGCTACACCAGCCAGATCGCGCAATTGAACGCGACGTCCAGCGTTCAACA
TACGTTTAGCGTGGTACCCACTGTGCAACAGAAGCTGGAAGACAAGATCCAGGAGTCCAGCGAATTCCTGAAAAAAATCA
ACATCATTGGCGTCACCGAGCAAGAGGGCGAAAAACTCGGCCTGGGGGTCTCAGGCCCCATCGCCAGTCGCACCGATACC
AGCAAGGCCGAGCGCCAGACGCGCGACGTGTCCACCATGGACGGCCATCGTTATCGTTGCGAAAAGACCAATTTCGATAC
CCATATCGGCTACGCTAAACTCGACGCCTGGGCCAAATTCCAAGACTTCCAGAGCCGGATTGCCAATCAGATCCTGATTC
GCCAGGGACTGGACCGGATGGTGATTGGTTTCAATGGCACCAAGATTGCGTCGGATACCGACATTGCGGCCTATCCAATG
CTCCAGGACGTAAATAAGGGCTGGTTGCAGCATTTCCGTGAAGATGCGCCGCAACGGGTCATGTCCCAGGGAGAGGCGAA
GCCAGGCAAGCTGCTGATCGGCACCGGAGGTGATTACCTCAATCTTGATGCCGCTGTTGCTGACGGCATCAACCTGCTGG
ATCCCTGGTATCAGGAAGACACCGGCTTGGTCGCTTTTGTCGGCCGCAAGCTGTTGAACGACAAATATTTCCCGTTGATC
AACACCAAGCAAGCGCCTACCGAGACGCTGGCGGCCGACATCATCATCAGCCAGAAGCGCATCGGCGGCCTGCCGGCGGT
ACGCGTGCCTTTCTTCCCGGATAACGCCATCCTCATTACCCGTTTCGATAATCTGTCGGTGTACTTCCAGGACGGCGCGC
GCCGCCGCCGTGTAGAAGATGTTGCCAAGCGTGACCGCATCGAAAACTACGAGTCGTCCAATGATGCGTATGTAGTCGAA
GACTTCGGCCTGGGCGCTTTGTTGGAAAACATCGAGTTGGTGCCGTAG

Protein sequence :
MRANTRIAFEGYTSQIAQLNATSSVQHTFSVVPTVQQKLEDKIQESSEFLKKINIIGVTEQEGEKLGLGVSGPIASRTDT
SKAERQTRDVSTMDGHRYRCEKTNFDTHIGYAKLDAWAKFQDFQSRIANQILIRQGLDRMVIGFNGTKIASDTDIAAYPM
LQDVNKGWLQHFREDAPQRVMSQGEAKPGKLLIGTGGDYLNLDAAVADGINLLDPWYQEDTGLVAFVGRKLLNDKYFPLI
NTKQAPTETLAADIIISQKRIGGLPAVRVPFFPDNAILITRFDNLSVYFQDGARRRRVEDVAKRDRIENYESSNDAYVVE
DFGLGALLENIELVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 2e-90 57
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 3e-86 57
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 3e-86 57