Gene Information

Name : Atc_m181 (Atc_m181)
Accession : YP_004750412.1
Strain :
Genome accession: NC_015851
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 179640 - 180428 bp
Length : 789 bp
Strand : -
Note : -

DNA sequence :
ATGCTTGACGCCGACCGACTCGATCAACTGCTCACCCGGCTGCGACTGACCGCCATTCGCGACCAGCTCGATCATCTGCT
CGACGAAGCGAGCCGGTCGCAGATGACGCTGCGTGAAGCGCTGCTGTTTCTGGCCGAGCGTGAAGTCGCCCGGCGCGATA
GCCGGCGCATCCAGATGGGCATGAAGCTGGCGCGCTTTCCCTGTGTGCGTACGCTCGAAGGCTTCGACTACGAGGCCCAG
CCTTCGATCGATCCGGGGCAAATCCGCGATCTGGCCACGGGGCGCTGGATTGGTCACGGTCAGGCGCTACTGCTCCTGGG
TCCGCCCGGCGTGGGCAAGACGCACCTGGCGATCGCCCTGGGGCGCGAAGCGGTCGAGCACGGCTACAGCGTGCTTTTTA
CCTCGGCAGCGGCGTTGATGGCCGGTCTCACGAAGGCGCACGCCGAGGGCCGGCTCGAGGAAAAGCTGGTGCAATTGTCC
AAGCCCAAGCTGTTGATCATCGATGAACTGGGGTATCTGCCGCTGGAGCCGGCGGCAGCACACTTGTTCTTCCAACTGGT
CAGCCGGCGTTACGAGCGGGCCAGCATGCTCATCACCAGCAACCGGCCGGTGGGGGAATGGGGCCAGGTGTTCGGGGATG
CGGTGGCGGCTACCGCCATTCTCGACCGGCTGCTGCATCACAGCCAGGTCATCACGATTCGGGGCGACAGCTACCGCCTG
CGCGACAAGCGCCGTAGCGGGCTTCTGCAGAAGGCCGCTGCCCCCACCCCGATTACATCAGAGAGTTGA

Protein sequence :
MLDADRLDQLLTRLRLTAIRDQLDHLLDEASRSQMTLREALLFLAEREVARRDSRRIQMGMKLARFPCVRTLEGFDYEAQ
PSIDPGQIRDLATGRWIGHGQALLLLGPPGVGKTHLAIALGREAVEHGYSVLFTSAAALMAGLTKAHAEGRLEEKLVQLS
KPKLLIIDELGYLPLEPAAAHLFFQLVSRRYERASMLITSNRPVGEWGQVFGDAVAATAILDRLLHHSQVITIRGDSYRL
RDKRRSGLLQKAAAPTPITSES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 6e-39 47
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 7e-44 47
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 9e-44 47
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 7e-44 47
unnamed CAA21402.1 - Not tested HPI Protein 9e-44 47
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 7e-44 47
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 7e-44 47
api84 CAF28558.1 putative transposase Not tested YAPI Protein 7e-44 47
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 7e-44 47
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 9e-44 46
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 9e-44 46
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 8e-44 46
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 6e-43 46
istB AAN62229.1 putative NTP-binding protein of insertion sequence Not tested PAGI-3(SG) Protein 7e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Atc_m181 YP_004750412.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 4e-39 47
Atc_m181 YP_004750412.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 4e-44 47
Atc_m181 YP_004750412.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 4e-44 47
Atc_m181 YP_004750412.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 4e-44 47
Atc_m181 YP_004750412.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 4e-43 46