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Name : Atc_0977 (Atc_0977) Accession : YP_004748326.1 Strain : Acidithiobacillus caldus SM-1 Genome accession: NC_015850 Putative virulence/resistance : Resistance Product : arsenic efflux pump protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 971053 - 972360 bp Length : 1308 bp Strand : + Note : - DNA sequence : ATGCTTGCCCTGGCCATCTTCGTTGTGACCCTGATCCTCGTCATCTGGCAGCCCAAGGGACTCCAGATCGGTTGGAGTGC CATGGGCGGTGCGGTCGTCGCCCTGGCCACCGGGGTCATCACCTGGAGCGATATTCCTGTGGTCTGGCATATCGTCTGGG ATGCTACCTTTACCTTCGTCGCCCTCATCATCATCTCCCTGATTCTGGACGAAGCCGGTTTCTTCCATTGGGCGGCTCTG CACGTGGCGCGCTGGGGCGGTGGGCGTGGGCGTCGGCTCTTCCCCCTCATCGTCCTGCTGGGGGCGATGATTTCTGCCGT ATTCGCCAACGACGGGGCGGCGCTGCTGCTCACCCCCATCGTCATGGCCATCCTGTTGCGGCTCGACTTCTCACCCAAGG CCACCTTCGCCTTTGTCATCGCCACCGGTTTTGTGGCCGATACCACCAGTCTGCCGCTGATGATCTCTAACCTCGTCAAC ATCGTCAGCGCCAATTATTTCAATATCACGTTTGATCGCTATGCCCTGGTGATGGTACCGGTGGATCTGGTGGCACTGGC GGCCACCCTGGGGGTGCTCTGGCTTTACTTTCGTCGCTCCGTGCCCGCGTCCTATCCTACCGCCCACCTCGACGCTCCGC GCACGGCCATCCAGGATCCTGTGGTCTTCCGTGCCGCCTTTCCGGTGCTGGTTTTGCTACTAATCGCCTACTTCGTTACC GCGCAGTGGCAGGTACCGGTATCGGTGGTGACGGGGGCTGGGGCGCTGATCCTCCTCGCTTTGGCCGGACGTTGGTTGCA GGGCGGGCGCGGCGCCCGCATTCCCGTACGCAAGGTCTTGCACGAGGCCCCCTGGCAGATCGTGATTTTCAGCCTCGGGA TGTATCTGGTGGTCTATGGGCTGCGCAATGCCGGTTTGACCAACTATGTGGCCATGGCCCTGGCGTATCTGGCGGCACAA GGTACCGTTCTGGCGGCGATTGGGTCAGGCTTCCTGGCCGCGGCGCTGTCCTCGGTGATGAACAACATGCCGGCGGTTTT GGTGGGCGCCTTGGCCATCCACCAACTGCCGGTGGCCACGGATCCGTTGATACGGGAAATCTTCGTCTACGCCAACATCA TCGGTTGCGATCTTGGCCCCAAGTTCACGCCCATCGGCAGTCTGGCCACCCTGCTCTGGCTGCATGTGCTGGGCCGCAAA GGCATGACCGTGACCTGGGGCCAATACATGCGCACCGGACTCCTCATCACCCCGCCGGTACTGTTCCTGACGCTGCTGGC CTTGGCGGCTTGGTTGCCACTACTCTGA Protein sequence : MLALAIFVVTLILVIWQPKGLQIGWSAMGGAVVALATGVITWSDIPVVWHIVWDATFTFVALIIISLILDEAGFFHWAAL HVARWGGGRGRRLFPLIVLLGAMISAVFANDGAALLLTPIVMAILLRLDFSPKATFAFVIATGFVADTTSLPLMISNLVN IVSANYFNITFDRYALVMVPVDLVALAATLGVLWLYFRRSVPASYPTAHLDAPRTAIQDPVVFRAAFPVLVLLLIAYFVT AQWQVPVSVVTGAGALILLALAGRWLQGGRGARIPVRKVLHEAPWQIVIFSLGMYLVVYGLRNAGLTNYVAMALAYLAAQ GTVLAAIGSGFLAAALSSVMNNMPAVLVGALAIHQLPVATDPLIREIFVYANIIGCDLGPKFTPIGSLATLLWLHVLGRK GMTVTWGQYMRTGLLITPPVLFLTLLALAAWLPLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 9e-114 | 62 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 9e-95 | 52 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 6e-96 | 52 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 9e-96 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Atc_0977 | YP_004748326.1 | arsenic efflux pump protein | BAC0576 | Protein | 1e-111 | 62 |
| Atc_0977 | YP_004748326.1 | arsenic efflux pump protein | BAC0577 | Protein | 4e-114 | 62 |
| Atc_0977 | YP_004748326.1 | arsenic efflux pump protein | BAC0578 | Protein | 6e-112 | 62 |
| Atc_0977 | YP_004748326.1 | arsenic efflux pump protein | BAC0031 | Protein | 3e-108 | 61 |
| Atc_0977 | YP_004748326.1 | arsenic efflux pump protein | BAC0575 | Protein | 1e-97 | 52 |
| Atc_0977 | YP_004748326.1 | arsenic efflux pump protein | BAC0574 | Protein | 1e-95 | 52 |
