Gene Information

Name : Atc_0074 (Atc_0074)
Accession : YP_004747425.1
Strain : Acidithiobacillus caldus SM-1
Genome accession: NC_015850
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 83526 - 84962 bp
Length : 1437 bp
Strand : +
Note : -

DNA sequence :
TTGATTCGTCGAACCAAGATCGTTGCCACCCTTGGCCCCGCCAGCTCGGAGGTCGAGGTCATCGACCGGCTGATCGAGGC
GGGTGTGGACGTCGTCCGCCTCAACTTTTCTCACGGTACCGCCGAAGATCACGTCCGCCGCGCGGAACTGGTGCGCGAGC
GCGCCCGTGCCCACGGTCGGGCGGTGGGCGTGCTTGCCGATCTGCAGGGGCCGAAAATCCGCATTGGCAAGTTTGCCGAG
GGTAAGATTCAGCTACGTGAAGGCGACTCCTTCATCCTGGACAGCGCCTGCCAACTGGGCGACCAGGGACGGGTAGGCAT
CACCTATCCGCAGCTCGTCGGTGATGTGGAGCGGGGTGCCACCCTGTTGCTCAATGACGGCATGATCGTGCTGTGGGTGG
ACCGGGTACAGGGGACCGAGATCCACACCCGAGTCGTCCAGGGCGGTGAGCTTTCCAATAACAAGGGCATCAATCGCGCG
GGCGGCGGGCTCACGGCCCCGGCCCTGACCGACAAGGATCGTGCCGACATCCTCACGGCGGCGCAGTTGGAGGCCGATTA
TCTGGCCGTGTCCTTTCCGCGCGGCGCGGCGGATATGGACGAGGCGCGTCGCCTCTTTCGCGAGGCCGGTGGTCACGGTG
CCCTGGTGGCCAAGATCGAACGGGCGGAGGCGGTGGCCGCCATCGAGGAAATCCTCGCGGTTTCCGAAGTGGTCATGGTG
GCTCGCGGAGATCTTGGCGTGGAGATCGGCGACGCCGCGGTACCACCGGTGCAGAAGCGGATCATTGCCCTGGCCCAGAA
ATATGGTCGGGTCACCATCACCGCAACACAGATGATGGAGTCCATGATCCACCAGCCCATCCCCACCCGGGCCGAGGTCT
CGGACGTGGCCAATGCCGTGCTGGACGGCACCGACGCCGTCATGCTGTCGGCGGAGACGGCGAGCGGTGCCTTCCCGGTG
GAGGCCGTCGCCGCCATGGCGCGAACCTGTCTTGAGGTGGAACGGCAGATGCCCTGCGGCGGGACCTCGCCGGTGCCGGA
TCAGGCCCTGCAACGGGTGGACGAGACCATTGCCGCGGCGGCCATTCTCGCCACCCAGAGGGCCCCCATCGCCGCCATCG
CGGCTTTCACCGAGAGTGGCTCCACTGCCCTGTGGCTCTCCCGGGCCCAGCCCCGGGTACCCATTTATGCCCTGACACCC
CAGGTGTACACCCGGCGACGGGTGACCCTCTATCGCGGTGTCTACCCGGTGAACTTCCCCCAGAGTCGCCACGACGATCC
GGCCCAGGTCATGCGCGCGGCGGAGGATGAGCTGCGTCGGCGCGGCGTCGTGCGCGAGGGCGATCTCATTCTCATCACCA
TTGGCGAGCCCATCGGCGCCCCTGGTGGTACCAATACCCTCAAGATCGTGCGTATTGGCGGGCCGCAGCGTGCATGA

Protein sequence :
MIRRTKIVATLGPASSEVEVIDRLIEAGVDVVRLNFSHGTAEDHVRRAELVRERARAHGRAVGVLADLQGPKIRIGKFAE
GKIQLREGDSFILDSACQLGDQGRVGITYPQLVGDVERGATLLLNDGMIVLWVDRVQGTEIHTRVVQGGELSNNKGINRA
GGGLTAPALTDKDRADILTAAQLEADYLAVSFPRGAADMDEARRLFREAGGHGALVAKIERAEAVAAIEEILAVSEVVMV
ARGDLGVEIGDAAVPPVQKRIIALAQKYGRVTITATQMMESMIHQPIPTRAEVSDVANAVLDGTDAVMLSAETASGAFPV
EAVAAMARTCLEVERQMPCGGTSPVPDQALQRVDETIAAAAILATQRAPIAAIAAFTESGSTALWLSRAQPRVPIYALTP
QVYTRRRVTLYRGVYPVNFPQSRHDDPAQVMRAAEDELRRRGVVREGDLILITIGEPIGAPGGTNTLKIVRIGGPQRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 4e-71 47
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-49 41
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 7e-50 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 7e-50 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 7e-50 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Atc_0074 YP_004747425.1 pyruvate kinase VFG0479 Protein 3e-50 41