Gene Information

Name : Atc_0574 (Atc_0574)
Accession : YP_004747924.1
Strain : Acidithiobacillus caldus SM-1
Genome accession: NC_015850
Putative virulence/resistance : Unknown
Product : Site-specific recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 582718 - 583644 bp
Length : 927 bp
Strand : +
Note : -

DNA sequence :
TTGATTGCTACTGCGACGCCCGGGAGAGCGGCGCGAGATCCCGTAGACGAGGATTTAGCGCGCTTTCTCGATCACCTTTG
GCTGGAGGGCAATCTGGCTGCCAACAGCCTCGAGGCCTACAGTCGCGATCTGCGCCTACTGGCCACGTATCTGGCGGCCT
CCCAGCGGCGTCTGCGCGATGCCGATGCCGCCGATCTGTCCCTCTTTCTTGCCCAGCGCCTGCAGGGAGGCGCGGCTCTG
CGTAGCGTTGCCCGGCAACTTTCCAGCCTGCGACGCTTCTACGCCTTTGCGCAGCGGGAAGGCTGGCGCGGTGACGACCC
CAGCGCGTCGTTGCAGCATCTGCACATCGGTCGGCACCTGCCCGCCGTACCCAGCGAAGGGGAGGTGGATGCCCTGCTTG
CGGCACCCGATCGCCGTACCGTACTCGGTCTTCGCGATGCGGCCATGTTGGAGACCCTCTACGCCACCGGTTTGCGGGTG
TCGGAACTGGTGGGCCTGCTCTGCTCACAGCTGGATCTCGAGGCTGGCGTCGTCCTGACCCTAGGTAAAGGCAGCAAAGA
GCGGCTGATTCCCGTGGGCGAGGTGGCTCTGGAGACCCTCCACCGCTACCTGCGGGAGGCCCGCGGTGCCTTGCTCGGGC
ACAAACAAAGTCCTGCCCTTTTCCTGACGGTCCGTGGCGAAGCCATGAGCCGCCAGAGGTTCTGGCAGACCATCAAGGCC
CATGCGACGAAGGCAGGGATTCGCAGCGCCTTCTCGCCGCACAGCCTGCGTCACGCTTTTGCCACCCACCTCCTGGATCA
CGGCGCCGATCTGCGCAGTGTCCAGCTCATGCTCGGTCACGCGCAACTGAACACCACAGAAATCTACACCCACATTGCGC
AGGCGCGTCTGCAAAACCTGCACCGACAGCATCACCCCCGCGGCTGA

Protein sequence :
MIATATPGRAARDPVDEDLARFLDHLWLEGNLAANSLEAYSRDLRLLATYLAASQRRLRDADAADLSLFLAQRLQGGAAL
RSVARQLSSLRRFYAFAQREGWRGDDPSASLQHLHIGRHLPAVPSEGEVDALLAAPDRRTVLGLRDAAMLETLYATGLRV
SELVGLLCSQLDLEAGVVLTLGKGSKERLIPVGEVALETLHRYLREARGALLGHKQSPALFLTVRGEAMSRQRFWQTIKA
HATKAGIRSAFSPHSLRHAFATHLLDHGADLRSVQLMLGHAQLNTTEIYTHIAQARLQNLHRQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-52 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-52 54