Gene Information

Name : Atc_0479 (Atc_0479)
Accession : YP_004747829.1
Strain : Acidithiobacillus caldus SM-1
Genome accession: NC_015850
Putative virulence/resistance : Unknown
Product : ATP-dependent hsl protease ATP-binding subunit HslU
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1220
EC number : -
Position : 490217 - 491542 bp
Length : 1326 bp
Strand : -
Note : -

DNA sequence :
ATGCGTGAAATGACTCCGCGGGAGATCGTCCAGGAGCTGGACAAGTACATCGTCGGCCAAGATGAGGCGAAGCGAGCGGT
GGCCGTCGCCCTGCGCAACCGCTGGCGGCGCGCGCAGGTGAGCGGGGATCTGCGCGCGGAGATCACGCCCAAGAATATCC
TCATGATCGGCCCCACGGGCGTTGGCAAGACCGAGATTGCGCGACGCCTGGCCCAGCTGGCCAAGGCGCCCTTCATCAAG
GTCGAGGCCACTAAATTCACCGAGGTGGGCTACGTGGGCAAGGATGTGGAGTCCATCATCCGCGATCTTGCTGAAATTGC
GGTCAATCTGGTGCGCAACGAGCGCCAGCAGGCAGTGGGCCTGCGCGCCGAGGAGTTGGCCGAGGAACGTATCCTCGATG
CGCTTCTGCCAGGTCCGCGCGATGCCAGCCTGCCGCGTCAGGACGAGAATACCCGGCAGAAATTCCGCAAGATGCTGCGC
GAAGGCAAGCTGGACGACAAGGAAATCGACATCGAGATCCGCGCCAGTAAAGGGCCCGGTGTCGAGTTCATGGCGCCCCC
AGGGATGGAGGAAATGGGAGCACAACTGCGCGATCTATTTGCGCGTATGGCGCCGCACAATACGCAACGGCGCAAGGTGA
GCGTTGCCGAAGCACGGACGCTGCTGCGCGATGAGGAAGCCGCCAAACTGGTGAACGAGGACGAGGTCCGCAGTACGGCC
TTGGAACGTCTGCAGGCGGACGGCATCGTCTTCATCGACGAAATCGACAAGGTTACCTCCCGTAACAACGCCCAGAGCGG
CCCGGACATCTCCCGTGAGGGGGTGCAGCGGGATCTGCTCCCGCTGGTGGAAGGGTCCAATGTGAGCACCCGTTATGGCG
TAGTCAAGACCGATCACATTCTGTTCATAGCCTCGGGAGCGTTTCACCTGAGCAAGCCCTCGGATCTCATCCCGGAACTT
CAGGGGCGGCTACCCATCCGCGTCGAGCTTCAGGCCCTGAGTGCCGCAGACCTGGAGCGCATACTGCGCGAACCCGAAAA
CGCTCTGGTGCGTCAGTACACCGCCCTGCTCGCGGCGGACGAGGTCGAACTGCGCTTCACCGACGACGGCATCCGCCGCA
TTGCCGAGATTGCCCAGCAGGTGAACGAAGGTGTGGAAAATATCGGCGCGCGCCGCCTGCACACGGTTATGGAGCGTCTT
CTGGAAGACCTCGCCTTTCGCGCGCCCGACGCTGGCATCGGCGAGATCACCATCGATACCGACTACGTCAACGCGCGCCT
GGGCGATCTCGCCGCCGACGAGGATCTCTCCCGCTACATTCTGTGA

Protein sequence :
MREMTPREIVQELDKYIVGQDEAKRAVAVALRNRWRRAQVSGDLRAEITPKNILMIGPTGVGKTEIARRLAQLAKAPFIK
VEATKFTEVGYVGKDVESIIRDLAEIAVNLVRNERQQAVGLRAEELAEERILDALLPGPRDASLPRQDENTRQKFRKMLR
EGKLDDKEIDIEIRASKGPGVEFMAPPGMEEMGAQLRDLFARMAPHNTQRRKVSVAEARTLLRDEEAAKLVNEDEVRSTA
LERLQADGIVFIDEIDKVTSRNNAQSGPDISREGVQRDLLPLVEGSNVSTRYGVVKTDHILFIASGAFHLSKPSDLIPEL
QGRLPIRVELQALSAADLERILREPENALVRQYTALLAADEVELRFTDDGIRRIAEIAQQVNEGVENIGARRLHTVMERL
LEDLAFRAPDAGIGEITIDTDYVNARLGDLAADEDLSRYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 5e-96 48