Gene Information

Name : Atc_0457 (Atc_0457)
Accession : YP_004747808.1
Strain : Acidithiobacillus caldus SM-1
Genome accession: NC_015850
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 471798 - 472469 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence :
GTGCGGCTTCTGCTGATCGAGGACGACGTCATGCTGGGTGAGGCCCTGGTCATTGCCCTGCGCGAAGGCGGTCATGCCGT
CGACTGGCTGCGCAGCGCCAGGACGGCGCGCACCGCCCTGAACCCCCCGGAACACGAGGTTCTGTTGCTGGATCTGGGCC
TTCCCGATGGGGAGGGCCTGGACCTCTTGCGGGAACTGCGCGAGCGCGGTAGCTCCCTGCCCGTCATCATCTTGAGCGCC
CGCGATGCCCTGGAAACCCGCATCGAGGGTCTGGACAGCGGTGCCGACGACTACCTCGTAAAACCCTTCGCCAGCAGCGA
GCTACTAGCGCGCCTGCGCGTGCTGCAGCGGCGCCAGGGCGGCAGCGGTCAGGCCATCCTCAGCAACGGCAAGATCCATA
TGGATCCGGCGAGCTTCGAAGCCTGGCGGGAGGGGCAAGAGGAGCAACGACAGCGCCTCGGCCAGCGGGAATTTGCCCTA
CTCTCCACCTTACTGTCCCGCCCCGGCGTCATCTTCAGCCGTCAAGAGCTGGAGACGCGCCTCTACCCCTGGGGGGAAGA
GGTGGAGAGCAACAGCATAGACTTTCTCATCCACAGCCTGCGGCGCAAACTGGGTAGCGATGCCATCCAGAACATCCGCG
GTGCCGGCTGGCTGGTGGAGCGGCGCGGGTGA

Protein sequence :
MRLLLIEDDVMLGEALVIALREGGHAVDWLRSARTARTALNPPEHEVLLLDLGLPDGEGLDLLRELRERGSSLPVIILSA
RDALETRIEGLDSGADDYLVKPFASSELLARLRVLQRRQGGSGQAILSNGKIHMDPASFEAWREGQEEQRQRLGQREFAL
LSTLLSRPGVIFSRQELETRLYPWGEEVESNSIDFLIHSLRRKLGSDAIQNIRGAGWLVERRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-14 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Atc_0457 YP_004747808.1 winged helix family two component transcriptional regulator VFG0473 Protein 3e-19 42