|
Name : Atc_0438 (Atc_0438) Accession : YP_004747789.1 Strain : Acidithiobacillus caldus SM-1 Genome accession: NC_015850 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 449664 - 450323 bp Length : 660 bp Strand : + Note : - DNA sequence : GTGGCACGCTGTACCGTCGAGCGCCTGATGCGCTCTCAAGGTTGGCAGGGGGTCCGACGCGGCAAGCGGCAAAAGACGAC GATTGCTGACCAACAGCAGCCCTGTCCGCAGGATTTGGTGCAGCGAGATTTTCGTGCCGAGCGGCCCAACCAGCTCTGGG TGGCAGACTTCACCTATGTGTCGACCTGGGAAGGGTGGACCTACGTGGCCTTCATCATTGATGTTTTCTCCCGCAGGATC GTCGGTTGGCAAACCAGCACCACCATGCACACGGACTTTGTTCTGGATGCTCTGGAGCAGGCCATCCACTCCCGGCGCCC CGGCCAAGGACTCACGCACCATTCTGACCGAGGCTCACAGTACCTTAGCATTCGCTATTCGGAGCGGTTAGAAGAAGCGG GTATTGCGGCTTCCGTGGGCAGCAAGGGGGACTCCTACGACAACGCCTTGGCCGAGACCGTCAATGGTCTCTACAAAGCC GAAGTCATCCATCACCGCGGTCCCTGGAAGAACCGGACATCTGTGGAGTGGGCCACCTTGGAATGGGTCCACTGGTACAA CACGGATCGGTTGTATGGACCCTTGGGATACATCAGCCCAGCAGAAGCAGAGGAGAACTACTATGCTCAGTTGAAACTGT CCACCTCAAAAGCAGCATGA Protein sequence : MARCTVERLMRSQGWQGVRRGKRQKTTIADQQQPCPQDLVQRDFRAERPNQLWVADFTYVSTWEGWTYVAFIIDVFSRRI VGWQTSTTMHTDFVLDALEQAIHSRRPGQGLTHHSDRGSQYLSIRYSERLEEAGIAASVGSKGDSYDNALAETVNGLYKA EVIHHRGPWKNRTSVEWATLEWVHWYNTDRLYGPLGYISPAEAEENYYAQLKLSTSKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c3594 | NP_755469.1 | transposase | Not tested | PAI I CFT073 | Protein | 7e-45 | 67 |
| S4063 | NP_839232.1 | IS629 orfB | Not tested | SHI-2 | Protein | 2e-57 | 64 |
| Z4334 | NP_289559.1 | IS629 transposase | Not tested | OI-122 | Protein | 4e-58 | 64 |
| ECO111_3721 | YP_003236061.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 7e-57 | 64 |
| ECO111_3776 | YP_003236111.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 7e-57 | 64 |
| tnpC | AAD44736.1 | TnpC | Not tested | SHI-2 | Protein | 6e-53 | 63 |
| unnamed | AAL67406.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 6e-56 | 63 |
| IS629 | CAI43840.1 | transposase for IS629 | Not tested | LEE | Protein | 2e-55 | 63 |
| Z1660 | NP_287162.1 | transposase for IS629 | Not tested | TAI | Protein | 2e-57 | 63 |
| ECO103_3585 | YP_003223443.1 | IS629 transposase OrfB | Not tested | LEE | Protein | 5e-55 | 63 |
| Z1198 | NP_286733.1 | transposase | Not tested | TAI | Protein | 2e-57 | 63 |
| Z1638 | NP_287141.1 | transposase | Not tested | TAI | Protein | 2e-57 | 63 |
| Z1221 | NP_286756.1 | transposase | Not tested | TAI | Protein | 2e-57 | 63 |
| c5178 | NP_757026.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 9e-56 | 63 |
| APECO1_3499 | YP_854312.1 | transposase for IS629 | Not tested | PAI I APEC-O1 | Protein | 2e-56 | 63 |
| ORF_34 | AAZ04444.1 | putative IS629 transposase | Not tested | PAI I APEC-O1 | Protein | 2e-56 | 63 |
| unnamed | AAL67398.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 6e-56 | 63 |
| c5213 | NP_757061.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 1e-56 | 63 |
| IS629 | CAI43821.1 | transposase for IS629 | Not tested | LEE | Protein | 1e-54 | 62 |
| IS629 | CAI43909.1 | transposase for IS629 1 | Not tested | LEE | Protein | 1e-54 | 62 |
| IS629 | CAC37926.1 | transposase for IS629 | Not tested | LEE | Protein | 1e-54 | 62 |
| unnamed | CAD42083.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 1e-53 | 61 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Atc_0438 | YP_004747789.1 | integrase catalytic subunit | VFG1715 | Protein | 3e-45 | 67 |
| Atc_0438 | YP_004747789.1 | integrase catalytic subunit | VFG1602 | Protein | 7e-54 | 61 |
