Gene Information

Name : Atc_0425 (Atc_0425)
Accession : YP_004747776.1
Strain : Acidithiobacillus caldus SM-1
Genome accession: NC_015850
Putative virulence/resistance : Unknown
Product : ISMca7, transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3039
EC number : -
Position : 437498 - 438466 bp
Length : 969 bp
Strand : +
Note : -

DNA sequence :
ATGGCGGGCCAGATGACGTTTGCAGAGACAATGGGGCTGTCGCGCCGACACAAGGAGACCAAGCGGGAGCGTTTCCTTCG
GGAGATGGACCAGGTGGTGCCTTGGCAGCCGTTGATTGAGTGCATCGCTCCCTACTACCCCAAAGCTGGACCGCGTGGCG
GTCGCAAGCCCATGCCGATAGAGCAAATGCTGCGTATTCACTTCCTGCAGCAATGGTATGCCTACTCGGACCCGGGCATG
GAAGAGGCCCTGTATGAAATTCCCTTGCTACGGGCCTTTGCCGGTATCGACTTGGGCCGCGACCTGATCCCCGACGAGTC
CACTATCCTGCGCTTTCGTCGCCTGCTCGAGCAGCACGGCTTGGCGCAACAGATATTTGCCCAAGTACAGGAGCTGCTGG
AAGCCTCCCACTTGATTCTGCAGGAAGGCAAGATGGTGGATGCCACCTTGATTCACGCCCCCAGCTCGACCAAGAATCGA
GACCGCAAACGGGACCCCGAAATGCATCAAACCAAGAAGGGGAACCAATGGTATTTCGGCATGAAGGCCCATGTCGCGAC
GGACACGCAAGGCCTGGTTCAGGCTGTCGAGTTCACCGCGGCCCATGTTCCGGACCATCGGGTGCTGGAAGAGCTGCTGA
CCGGAGACGAGAAGACGGTGCTCGCCGATCGTGGCTACGATTACCCGCAGGTCCATGAATTTTTGCGCAAGCAGGGGATT
CAGGATGCCGTGGCCCGACGTCGCTATCCCGGCCAGAGGACGGGGCTACAGGCACTCAAGCGTTTCAACCGCCGTGTGGC
AAGCATCCGTGCGCGTGGTGAACATGCCTTCCGCGTCCTGAAGTGTCAGTTTGGCTACCACAAGACCCGCTATCGAGGCC
TGACCAAAAACGGTGCGCAACTGACCACCTTGTTTGCCCTGGTGAACCTCTATCTGGTTCGTAAGGAGCTCTGTTGGTTA
CGGGCGTAA

Protein sequence :
MAGQMTFAETMGLSRRHKETKRERFLREMDQVVPWQPLIECIAPYYPKAGPRGGRKPMPIEQMLRIHFLQQWYAYSDPGM
EEALYEIPLLRAFAGIDLGRDLIPDESTILRFRRLLEQHGLAQQIFAQVQELLEASHLILQEGKMVDATLIHAPSSTKNR
DRKRDPEMHQTKKGNQWYFGMKAHVATDTQGLVQAVEFTAAHVPDHRVLEELLTGDEKTVLADRGYDYPQVHEFLRKQGI
QDAVARRRYPGQRTGLQALKRFNRRVASIRARGEHAFRVLKCQFGYHKTRYRGLTKNGAQLTTLFALVNLYLVRKELCWL
RA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 6e-70 54
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 1e-53 51
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 1e-53 51
unnamed AAO33449.1 putative transposase Not tested Not named Protein 1e-48 48
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 4e-52 43
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 4e-52 43