|
Name : Atc_0315 (Atc_0315) Accession : YP_004747666.1 Strain : Acidithiobacillus caldus SM-1 Genome accession: NC_015850 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase (class II) Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 335899 - 337386 bp Length : 1488 bp Strand : + Note : - DNA sequence : GTGGACCAGGAACTCAACGACCAGATGCAGGTGCGGCGCCACAAGCTCGAGCGTTGGCGCGAGCAGGGTGCGGCCTATCC CAACGGGTTCCGGCGCGATGCCGAAGCGGCGGAGTTGCACCGGCGCTACGACCAGAGCGACGCGGCGGAACTCGATGCCC AGGCGGTGCAGGCGCACCTGGGCGGACGCCTCATGAGCCGGCGCATCATGGGCAAGGCGAGTTTCGCCGACCTACAGGAT GGGAGCGGCCGCTTGCAGCTTTTCTTCAGCCGCGACGAATTGGGCGAAGACGCCTACGCCCAGTTCAAGGAGCTGGATCT GGGCGACGTCATCGGCGTCGGCGGGCAGCTCTTCCGAACCAGGACGGGCGAGCTATCCCTGCGGGTGGCATCCTTTACCT TGCTGGCCAAGGCCCTGCGGCCCCTGCCCGAAAAATGGCATGGCCTCAGCGATCCGGAGACCCGCTTTCGCCAGCGCTAT GTGGACCTCATCGTCACCGAGTCGACGCGGCGGACCTTCCGGATTCGCAGCCAGACCGTGGCGGCGCTGCGCACCGTACT CAGCAACGACGGCTTCATCGAGGTGGAGACGCCCATGATGCAGCCCATCCCCGGTGGTGCGACGGCGCGTCCTTTCATTA CCCACCACCACGCCCTGGACATGACCCTGTACCTGCGCATCGCCCCGGAGCTTTATCTCAAGCGCCTGGTGGTGGGCGGT TTCGAGCGGGTTTTCGAGATCAACCGCAACTTTCGTAACGAGGGCGTGTCCACCCGGCACAACCCCGAATTCACCATGCT CGAGTGGTACGAGACCTATGCCGACTACACCATGGCCATGGACCGTTGCGAGACCCTCATCCGCGCCGCTGCCCAGGCGG CTCTGGGCAGTACCGATATCCACTATCAGGGGCTTGCCATCCATCTCGGCGAGCCCTTCGCGCGCCTTGGCGTGGCCGAA GCGGTGCGACGTTACCATCCGGATCTGGCGCACAAAGACCTGCGCGATGCGGGTGTCCTCGGCGATAAGCTGCGTGAACT GGGCCACCCGTGTCCCGCGGACTGGGGCTGGGGCAAGCGCCTTGTGGAACTCTTTGAAAAAACCGTGGAACCTCGCCTCG AGCAACCCACTTTCATCACCGAATACCCTCTGGAAGTAAGCCCCTTGGCCCGGCGCTGCAGTGCGGATCCCGAACTGACG GACCGTTTCGAGCTCTTCATTGCCGGGCGGGAACTGGCCAATGGGTTCTCGGAGCTCAACGATCCCGACGATCAGGCGGC CCGTTTCCGTGCCCAGGTGGCGGCCAAGGAGGCGGGGGACGAAGAGGCCATGTTCTTCGACGCCGACTACATCCGCGCCC TGGAGTACGGCATGCCGCCCACGGCGGGAGTTGGCCTGGGTGTGGACCGTCTGGTCATGCTCCTGGCGGATCAACCCAGT ATCCGGGAGGTCATCCTCTTTCCGCATCTGCGGCCGGAGCAGACGTGA Protein sequence : MDQELNDQMQVRRHKLERWREQGAAYPNGFRRDAEAAELHRRYDQSDAAELDAQAVQAHLGGRLMSRRIMGKASFADLQD GSGRLQLFFSRDELGEDAYAQFKELDLGDVIGVGGQLFRTRTGELSLRVASFTLLAKALRPLPEKWHGLSDPETRFRQRY VDLIVTESTRRTFRIRSQTVAALRTVLSNDGFIEVETPMMQPIPGGATARPFITHHHALDMTLYLRIAPELYLKRLVVGG FERVFEINRNFRNEGVSTRHNPEFTMLEWYETYADYTMAMDRCETLIRAAAQAALGSTDIHYQGLAIHLGEPFARLGVAE AVRRYHPDLAHKDLRDAGVLGDKLRELGHPCPADWGWGKRLVELFEKTVEPRLEQPTFITEYPLEVSPLARRCSADPELT DRFELFIAGRELANGFSELNDPDDQAARFRAQVAAKEAGDEEAMFFDADYIRALEYGMPPTAGVGLGVDRLVMLLADQPS IREVILFPHLRPEQT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-133 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Atc_0315 | YP_004747666.1 | Lysyl-tRNA synthetase (class II) | VFG1668 | Protein | 3e-133 | 53 |
